Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDTADYDTNTVLISNIASISFRIYESPLDTSHSFAATALDVENTLRRDGHLVVYDSARRGLWHFQILAQDEVNSHNVNATLDLCGHELVLVEEGLLEPASLQKWRSQQQQQPVQTPTSSRSSSSALDQAQRNGLFNLAPPGTLSTSQDQEAKMADPGIEPKPATSPHRAVYENFITALLLSISCTFCVRTGAVPLNYRTMLLVSETLEVGNPLDSCPQQCQIVATLKAYVTTTGVLVVSFALSRCRGLSSLAELVSSNLPRSGTSILAAPFGVVSNNQLSPMGDLGTVSLAQTPNTQALSLRVVHNRGDSLWKQACLKILKLRGIMSSAVADCAWVNLSVPKPRLQDAKSEAKRQQPSTATITIPWPGPLCFRKKMVNLPCMSLVGDTLRSGFEESHDPLSNARTWFNSAADRDQKASRRKADRNFALKEAQALDARPPKPSSPSPAAVRRPSAAAGGTIYPTPPDGIQHHNGVTPSMDGTLSSPGNTLSAAPANDADQGAFHASAVSDPIDIGDESKRQRSDHNLLGEADDTFGEMGGDMFGDHDITEADFSFFDEQPGGMDLDVAMADMGAATLPVVGVQEAPEAASQDKVTAQPERDDVVFAKPELKHARSSCNDAPSQRGRDNRLGPTKREASPFDPHTVFKRLRASLSTTARHHGFDTLRLDTSTIPQINRKYEQGGQFDYTKMANLEKPRLQQGALPETDYLKRHGKQGKRPKNGPFSAETFMKGLMGLESTGLQASPGRIESDDDDSSAGSDDDESCYSVEEPMSPVKSSIKLMPADDDVASQVTSLRDVESMEEPDQQLAVELPRLSKPESPELPLSLLFLDPEPLSLDLCLTDEDLIQVAQLLTDQAATGLLDIVSGQNGIAVLPATTLDSSTLTACSRNAVQVLREIVPSFLRGAAAVNLKGFLDIPDVPLLGQPTRVQPRPVPGRDHNAEPLRPSNLYQIPGPHLEVRRSEMKLSVLPSAVLFWESLGLAPSSGGKDVSAVCVFPGWTGMTDNVKAFLGCLKSVYEMLKLGSFESLALPAGLEAGALAYEVDRISTSPGPAMTGHGSALAQSMDTLLGALSSSEATAFNVVVYFIYWPSTPATIIEACIAFQRLSESYRKTGGQKDVVLQLVSANLISSPTAVVVTPAPELVKISMETYDRVSGNVMPAPAIRLEQPLPRIIDFKLTVSPSASLIRENSCIHIAYAQSVDDRWITAAWTDDRGNQQETASYCLGRRGRPASRSMNEVAHDMWELTLELISVWKVHWRVVITKCSPMDQHEIDFWAELARTEMKASVTMVLMTVDTNPSLQLLPPPVKLPYTTPVSTPPAAATATVSPEQTTDTTETESEAVLSDVTDQTWGAVVGHRLNVSLSVVDVHAALASGYLIKRTGSRLEDAPVLMEVNLVHTDASPRAYEPLLREMLSYFRGLGTLARARGVVQRETDVRPWHIAAAEKGVRALYLLM |
Length | 1455 |
Position | Kinase |
Organism | Ophiocordyceps unilateralis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Ophiocordycipitaceae> Ophiocordyceps. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.240 |
Instability index | 49.41 |
Isoelectric point | 5.26 |
Molecular weight | 157527.33 |
Publications | PubMed=26285697 PubMed=28970504 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP15393 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 755.80| 255| 272| 301| 570| 1 --------------------------------------------------------------------------- 301- 522 (328.11/188.98) ........................................................LRVV.................HNRG....................................DSLWKQACLK..ILKLRGIMSSAVADCAWVN....LSVPK.PRLQDAKSEAKRQQPStatitiPWPGPLCFRKKMVNLPCMS.LVG.DTLRsgFEESHDPLSNARTWFNSAADRDQKASRRKAD.RNFALKEAQALDARPPKPSSPSPAAVRRPSAAAGgtIYPTPPDGIQHHNGVTPSMDGTLSSPGNTLSAAPANDADQGAFHASAVSDPIDiGDESKRQRS 523- 793 (371.10/201.61) DHNLLGEADDTFG.EMggDMFGDHDITEADFS..FFDEQPggMDLDVAMADmgaatLPVVgvqeapeaasqdkvtaqPERD....................................DVVFAKPELK...........HARSSC...N.....DAPS.QRGRDNRLGPTKREAS......PFDPHTVFKRLRASLSTTArHHGfDTLR..LDTSTIPQINRKYEQGGQFDYTKMANLEKPRlQQGALPETDYLKRHGKQGKRPKNGPFSAETFMKG..LMGLESTGLQASPGRIESDDDDSSAGSDDDESCYSVEEPMSPVKSSIKLMPAD.DDVASQVTS 796- 935 (56.59/21.42) DVESMEEPDQQLAvEL..PRLSKPESPELPLSllFLDPEP..LSLDLCLTD..............................edliqvaqlltdqaatglldivsgqngiavlpattlDSSTLTACSRnaVQVLREIVPSFLRGAAAVNlkgfLDIPDvPLL....GQPTRVQPR......PVPG............................................................................................................................................................. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 295.63| 100| 106| 982| 1087| 2 --------------------------------------------------------------------------- 982- 1033 (40.31/37.87) ..........................................................PSSGGKDVSAvCVfpGWTGMTDNVKAFLG.CLKSVyeMLKLGSFESLALPAGL 1034- 1134 (150.95/104.81) EAGALAYEV.DRISTS..PGPAMTGHgSALAQSMDTLLGALSSSEATAFNVVVYFIYwPSTPATIIEA.CI..AFQRLSESYRK.TG.GQKDV..VLQLVSANLISSPTAV 1141- 1224 (104.38/65.93) ELVKISMETyDRVSGNvmPAPAIRLE.QPLPRIIDFKLTVSPSASLIRENSCIHIAYaQSVDDRWITA.....AWTDDRGNQQETASyCL..................... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.77| 11| 1197| 242| 252| 4 --------------------------------------------------------------------------- 242- 252 (20.79/13.28) LSRCRGLSSLA 1414- 1424 (20.98/13.47) LSYFRGLGTLA --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) HDITEADFSFFD 2) LKEAQAL 3) TDYLKRHGK | 545 428 705 | 556 434 713 |
© 2021 Shailesh Lab
Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab