<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15328

Description Uncharacterized protein
SequenceMSACREIALLREMKHTNLICLQRVFLTNEKKVWLLLDYAEHDLWHIIKHHRNAKSKKTPVMVPKSMVKSILYQILDGIHYLHSNWILHRDLKPANILVMGDGPPSVRGRVKIADMGFARIFSNPLKPLAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTSEPVFFCKEEDIKAQSPYHYDQLKRIFSVMGYPSEADWSDIKKMPDYQKLHMDLKNQNATFGSCSMQRYMEKYKIESETQQFKLLLKLLTMDPIKRISCKDAMEDNYFKTDPKPTEDVFYKFDIPYPKRDYLPENDVKKSHAMPTEEQNTNPPINQADSEPANKRMRVMNAHNNGSSLKIGGTNSGTMYGASGAQTQSIQVQQAASSNRPITSGQEMHLQGNNQMQSSGASDMQQPIGAMSNQQPPAHHMHQQNMQGMMQQPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQQTHPQPGHYPMGMMQNQQQQQQQQQQQMMARQGAQGGHPHGQMGQAHPQMMGHGNQQAPPPYGMQNNDNMMMQGGQYMGQVQMGPGNNMNVQHGQWQQHRYQ
Length564
PositionKinase
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.07
Grand average of hydropathy-0.799
Instability index51.63
Isoelectric point8.84
Molecular weight64556.07
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15328
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     233.28|      37|      37|     431|     467|       1
---------------------------------------------------------------------------
  397-  423 (46.90/12.83)	SSGASD.....MQQPIGAMSNQQPPAHHM.................HQQ
  431-  467 (79.94/26.63)	QPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQ............QTHPQ
  468-  511 (49.19/13.78)	.PGH...YPMGMMQNQQQ.QQQQQQQQMMARQgaqgghphgqmgQAHPQ
  512-  542 (57.25/17.15)	MMGHGNQQAP...PPYGMQNNDNM...MMQGG............QYMGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.38|      33|      37|      50|      84|       2
---------------------------------------------------------------------------
   50-   84 (54.44/49.06)	HRNAKSKKTPVM..VPKSMVKSIlyQILD.GIHYLHSN
   88-  123 (49.94/36.97)	HRDLKPANILVMgdGPPSVRGRV..KIADmGFARIFSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.87|      22|      37|     128|     152|       3
---------------------------------------------------------------------------
  128-  152 (36.09/33.29)	LAEL...DPVvvtFWYRAPEL.LLGAKHY
  165-  190 (32.78/21.69)	FAELltsEPV...FFCKEEDIkAQSPYHY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.82|      37|      38|     262|     299|       4
---------------------------------------------------------------------------
  235-  262 (35.25/15.91)	.....SMQRYMEK..YKIESETQQ...FKLLL.KLLTMD
  263-  300 (62.26/37.29)	PIKRISCKDAMEDNYFKTDPKPTEDVfYKFDI.PYPKRD
  303-  335 (44.31/21.64)	PENDVKKSHAMPTEEQNTNP.PINQA....DSePANKR.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.62|      13|      28|     355|     367|       5
---------------------------------------------------------------------------
  355-  367 (23.67/11.17)	SGT.MYGASGAQTQ
  383-  396 (20.95/ 9.08)	SGQeMHLQGNNQMQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15328 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) YLPENDVKKSHAMPTEEQNTNPPINQADSEPANKRMRVMNAHNNGSSLKIGGTNSGTMYGASGAQTQSIQVQQAASSNRPITSGQEMHLQGNNQMQSSGASDMQQPIGAMSNQQPPAHHMHQQNMQGMMQQPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQQTHPQPGHYPMGMMQNQQQQQQQQQQQMMARQGAQGGHPHGQMGQAHPQMMGHGNQQAPPPYGMQNNDNMMMQGGQYMGQVQMGPGNNMNVQHGQWQQHRYQ
301
564










Molecular Recognition Features






MoRF SequenceStartStop




NANANA