<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15327

Description Uncharacterized protein
SequenceMNYILRHTNLICLQRVFLTNEKKVWLLLDYAEHDLWHIIKHHRNAKSKKTPVMVPKSMVKSILYQILDGIHYLHSNWILHRDLKPANILVMGDGPPSVRGRVKIADMGFARIFSNPLKPLAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTSEPVFFCKEEDIKAQSPYHYDQLKRIFSVMGYPSEADWSDIKKMPDYQKLHMDLKNQNATFGSCSMQRYMEKYKIESETQQFKLLLKLLTMDPIKRISCKDAMEDNYFKTDPKPTEDVFYKFDIPYPKRDYLPENDVKKSHAMPTEEQNTNPPINQADSEPANKRMRVMNAHNNGSSLKIGGTNSGTMYGASGAQTQSIQVQQAASSNRPITSGQEMHLQGNNQMQSSGASDMQQPIGAMSNQQPPAHHMHQQNMQGMMQQPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQQTHPQPGHYPMGMMQNQQQQQQQQQQQMMARQGAQGGHPHGQMGQAHPQMMGHGNQQAPPPYGMQNNDNMMMQGGQYMGQVQMGPGNNMNVQHGQWQQHRYQ
Length556
PositionKinase
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.08
Grand average of hydropathy-0.811
Instability index50.99
Isoelectric point8.88
Molecular weight63714.03
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15327
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     233.28|      37|      37|     423|     459|       1
---------------------------------------------------------------------------
  389-  415 (46.90/11.94)	SSGASD.....MQQPIGAMSNQQPPAHHM.................HQQ
  423-  459 (79.94/24.83)	QPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQ............QTHPQ
  460-  503 (49.19/12.83)	.PGH...YPMGMMQNQQQ.QQQQQQQQMMARQgaqgghphgqmgQAHPQ
  504-  534 (57.25/15.98)	MMGHGNQQAP...PPYGMQNNDNM...MMQGG............QYMGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.38|      33|      37|      42|      76|       2
---------------------------------------------------------------------------
   42-   76 (54.44/47.38)	HRNAKSKKTPVM..VPKSMVKSIlyQILD.GIHYLHSN
   80-  115 (49.94/35.72)	HRDLKPANILVMgdGPPSVRGRV..KIADmGFARIFSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.87|      22|      37|     120|     144|       3
---------------------------------------------------------------------------
  120-  144 (36.09/32.14)	LAEL...DPVvvtFWYRAPEL.LLGAKHY
  157-  182 (32.78/20.91)	FAELltsEPV...FFCKEEDIkAQSPYHY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.82|      37|      38|     254|     291|       4
---------------------------------------------------------------------------
  227-  254 (35.25/13.88)	.....SMQRYMEK..YKIESETQQ...FKLLL.KLLTMD
  255-  292 (62.26/32.26)	PIKRISCKDAMEDNYFKTDPKPTEDVfYKFDI.PYPKRD
  295-  327 (44.31/18.80)	PENDVKKSHAMPTEEQNTNP.PINQA....DSePANKR.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.62|      13|      28|     347|     359|       5
---------------------------------------------------------------------------
  347-  359 (23.67/11.55)	SGT.MYGASGAQTQ
  375-  388 (20.95/ 9.43)	SGQeMHLQGNNQMQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15327 with CDK8 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) YLPENDVKKSHAMPTEEQNTNPPINQADSEPANKRMRVMNAHNNGSSLKIGGTNSGTMYGASGAQTQSIQVQQAASSNRPITSGQEMHLQGNNQMQSSGASDMQQPIGAMSNQQPPAHHMHQQNMQGMMQQPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQQTHPQPGHYPMGMMQNQQQQQQQQQQQMMARQGAQGGHPHGQMGQAHPQMMGHGNQQAPPPYGMQNNDNMMMQGGQYMGQVQMGPGNNMNVQHGQWQQHRYQ
293
556










Molecular Recognition Features






MoRF SequenceStartStop




NANANA