<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15326

Description Uncharacterized protein
SequenceMSACREIALLREMKHTNLICLQRVFLTNEKKVWLLLDYAEHDLWHIIKHHRNAKSKKTPVMVPKSMVKSILYQILDGIHYLHSNWILHRDLKPANILVMGDGPPSVRGRVKIADMGFARIFSNPLKPLAELDPVVVTFWYRAPELLLGAKHYTKAIDVWAIGCIFAELLTSEPVFFCKEEDIKAQSPYHYDQLKRIFSVMGYPSEADWSDIKKMPDYQKLHMDLKNQNATFGSCSMQRYMEKYKIESETQQFKLLLKLLTMDPIKRISCKDAMEDNYFKTDPKPTEDVFYKFDIPYPKRDYLPENDVKKSHAMPTEEQNTNPPVTLESSFQIKNSGLQINQADSEPANKRMRVMNAHNNGSSLKIGGTNSGTMYGASGAQTQSIQVQQAASSNRPITSGQEMHLQGNNQMQSSGASDMQQPIGAMSNQQPPAHHMHQQNMQGMMQQPGHHQQFHPGQTQPQQMFQNQPMPAQMMQPQQTHPQPGHYPMGMMQNQQQQQQQQQQQMMARQGAQGGHPHGQMGQAHPQMMGHGNQQAPPPYGMQNNDNMMMQGGQYMGQVQMGPGNNMNVQHGQWQQHRYQ
Length579
PositionKinase
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.07
Grand average of hydropathy-0.782
Instability index51.82
Isoelectric point8.84
Molecular weight66188.89
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15326
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     327.80|      37|      37|     446|     482|       1
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  280-  341 (28.97/ 6.70)	TDPKPT.EdvFYKFD............IPYP.....KrdylpendvkkshaMPTEEQNTNPP....VTlessfqiknSGLQ...INQ
  342-  388 (36.06/10.29)	ADSEPAnK..RMRVM............NAHNngsslK..............IGGTNSGTMYGasgaQT.........QSIQ...VQQ
  393-  426 (38.30/11.43)	NRPITS.......GQ............EMH......L..............Q.GNNQMQSSG....AS.........DMQQpigAMS
  427-  465 (58.97/21.90)	NQQPPA.H..HM.................HQ.....Q.......nmqgmmqQPGHHQQFHPG....QT.........QPQQ...MFQ
  466-  497 (64.74/24.82)	NQPMPA.Q..MMQPQ............QTHP.....Q...............PGH...YPMG....MM.........QNQQ...Q.Q
  498-  543 (47.45/16.06)	QQQQQQ.Q..MMARQgaqgghphgqmgQAHP.....Q..............MMGHGNQQAP................PPYG...MQN
  544-  579 (53.31/19.03)	NDNM......MMQGG............QYMG.....Q...........vqmGPGNNMNVQHG....QW.........Q.QH...RYQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.38|      33|      37|      50|      84|       2
---------------------------------------------------------------------------
   50-   84 (54.44/50.03)	HRNAKSKKTPVM..VPKSMVKSIlyQILD.GIHYLHSN
   88-  123 (49.94/37.68)	HRDLKPANILVMgdGPPSVRGRV..KIADmGFARIFSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.87|      22|      37|     128|     152|       3
---------------------------------------------------------------------------
  128-  152 (36.09/26.12)	LAEL...DPVvvtFWYRAPEL.LLGAKHY
  165-  190 (32.78/17.01)	FAELltsEPV...FFCKEEDIkAQSPYHY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15326 with CDK8 domain of Kingdom Metazoa
Unable to open file!