<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15289

Description Uncharacterized protein
SequenceMYPSSSGAGHNPNPPRRGVNAALEPVQEWTIKEILFDGVEKRVKPDAFPDHIARMARQIDWMSLIDTDKRYDNPDLADLDDEEEYPKFEEELPTIPPEAGPWHTVAKNLHESLQQLNVLIDTIGIIRNTDYMKPLTVLDPLLIDSPTLTDFANQSKSSHWVWKRRALNEAIEVLGVSMRNRNPKEESTDEAHALRVGFFDELMALRNVWRIRKTGHRIYGDLGYHIFGMKYNSRELFEIKRRDLSVEEMNAFRGRNPLSLIQVSVPRDLMKRSNLVLKIVRDEDSGGLFGKTVEEDYEYMKVRPKEAEKVDWRRALRWAQQALVNRDVFEQLCTDASRMYNRNSVVKGNTLMHAMYDGLFLKVGELREPESDVFLARMLQQLVVTDECTRWIRPQMFVSMPLTTLPEQLDTRGSKAYTKVDIIEYARKQTRLLDKMGRIAGHYYMAQKVNAILLDFQNSSSDPSIQWRFVRTSIYSSFASVNITYRGYESLMGRHCFWVHIEHDGASVVTKEGQTIDCYRDKEFLQFMIKMQIVNANVTAATFLGKFTWHYSVITTNMNAMSDRKLPCPSALLCNEPSTKQIFMQFPVDRSPIIKMRKFPFTPEEELDEDHQFTTFEFSRLPGTTLCKKMEADAFPMQKVGSDFDQGAKYLPAENDLGNIEYKARLTNTNPARLQHLITQMKWRLREGQGEAIYELGVEDDGALTGLTDSDLEMSLATLQTMAKSLDASLTILAEREVSPKGASQRRTVAEVLVRKVPESQQFIELRLAVLGGCNVGKSTLCGVMTQGCLDDGNGKTRLNLFRFPHEVRTGKTSSVCLDVIGFDSRGKLVNYADNTLEEVVEKSTKLVTLIDLAGDAKYLKTTIHGLSAYRPHFSCLLISAETGTTAVTREHLGLLAALNIPFFVVITKKDLVDKTQLELVYENVRKLLARAGMNMSTKKIKNKRDAINAARVLSESGIIPVLSLSSVSGEGMRPFRCFLNVLSTAGTSDTRLQLADNEPLFTVEEIFTVPHVGIVVCGLLSEGRLHEGQTTLIGPFKDSSYHKAIITSIRRSRQPVRSLCAGEAASVAIRILNPDDVPLTFRRGLVMLAENATPTCCTRFTANLFLLSHCVKHLCVGFMGTVYIGSIRQTVRVVAIDNAEQAVEQLVWATVTMEFLTHPEFIREGTPLIFRQGKTKGMGEVVEILPQCQ
Length1190
PositionHead
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.08
Grand average of hydropathy-0.261
Instability index45.42
Isoelectric point6.97
Molecular weight134513.05
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GTP binding	GO:0005525	IEA:UniProtKB-KW
GTPase activity	GO:0003924	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15289
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.24|      18|     235|     776|     794|       1
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  776-  794 (30.56/23.10)	VGkSTLCGVMTQGCLDDGN
 1013- 1030 (32.68/19.91)	VG.IVVCGLLSEGRLHEGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     186.00|      61|     236|     360|     427|       2
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  360-  427 (86.87/61.99)	FLKVGELrePESDVFLARMLQQLVVTDECTRwIRPQMFvsmPLTTLPEQLDtRGSK...AYTKVDIIEY.AR
  601-  665 (99.13/50.14)	FTPEEEL..DEDHQFTTFEFSRLPGTTLCKK.MEADAF...PMQKVGSDFD.QGAKylpAENDLGNIEYkAR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15289 with Med17 domain of Kingdom Metazoa
Unable to open file!