<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15270

Description Uncharacterized protein
SequenceMAHRMLYQALCKVGDRVVYPALPAFAKPAWNHPAGPKTVFFWAPTIKWCLIGAGLADLARPADKLSASQNTALAGTGFIWTRYCLVITPINYYLSSVNFFVGCIGLTQLIRVAYYRRMEENGSCDLTCIASIVVVGLMWGATNPFLRMASASTSNADKNRDAKQSATSVCSRVASFIGSFILLLLDWRFSLPFALNQLASIVFQILVVYLPVSLVVPCVNAIQVASSAATSQLLGESRPSMQTAVGCLLVTFGVFIMMSCKTCDDKTRALTIIPKHLTWPLHPQICLLPANQAREQPNASSSEREQSIQQSLSQLSQQQHSGGTSASASLSNSAYESKTGIMRFRQAVINYVENNTLKYFFPNDIDRSTDVLGVLATVLLHNMEDPERDVIVEALVSLVTDYKDPSDPMQKTKRSTYEKVIDEILRYAYSEGALGLNRTVHGLILTSDFSLYTPLNLEKWRFIEECIPKLDYKGIQILIRTILINQFKDVPLVLSSEQMRQLTPIENMLLRLLDRENNALPAIFSMTEASRGSIVRSANIFPRLTATLSHLNAMFRPIADLTYVVGRPFMFPLPGHPAFLAAAPAWKMESDCNKISHKPAYLPYRPELKQPQVYTLYMLLKQPRGKEYLSNIIRQVSPHSLHTSPWEPLLSVFVCDVMCEAERLPENAEIPRYQWENLLSIFLHFVQIQHITISHIFKVLSSILEKTTYRRARDEVMWLALQLIGSFPALLNKETITEAARLYNVLFNEEVVWTGASDHPLKLTRFLAAACMWNILDGTDGLPQASSSLQVQVDFIRSKVDTADSEQALLAVLANAYRSDSNVYKNVKQAFAFWLIGPPNEELHFISYNRTVINKFAPIQTQYLDSLTMRAKNHVYIVCTSALQKSSFQLSRLPSPALIDTMARLVQTMEFDFSAKSFITLVVRTLQGAVCHQPLEGARESCYIFYEILCYRIPNIAIPVHARLYHIIMQTITAMITLPYTMPVEYMQQNIPPGSQSFSTCSLSAFHLYSVFEQTLIRQWAWTSHADLLYCAISFFHRQCATGIISLHFYFPPGKQLKPELMPYGPEEFKRASHIGLLLINPNYYSQTQEQQNNVVPPSAEISRMFFISLLRAMKIMGVETTPDCELFTAINQAYKWPASQFLSFPPEVYKLAQPESEEKIRDDEMKIKETVNRDFLAWQGMHTPTFMDYMLEPLKQGRSPLTIFCIVHQVLCEDIRRGSDIRNVVYSILEMYQPKHIQMATNALVEYVIALMNTSTNKTEEDLIIRVLMQLVFEWQLLPFDRLLNSLVLHPVTDRQSQLALAIVSAFCSDQCEPLTNRLNFYLQNVPPRRDNNQGEFFRRLAEYHHNFPELTYSEMRRRIEEPNLIDSNVHMPIYYGSLVERLLPIIDYTLARALELGTNDAFFVPIMSTFSKLYRYHPSPIQFVYTILFTLHEHIGNQERARNLTMHILAPSKSWSEESLLTQSFIAYNHQRSSHEQVIADLVDRLIQSSEFLTAPPAFCAQDWRFAEFPPATQTLYLACIELMASPYKPEIMVPAMINYLYGRRHKRPYSVLNAMALILTALPAIYGKVLQEEFLAAIDSEQLEDLRFEDIVLDNFEENMLLNMPNRAMIISVMLQAFWQHSHMVSISKYAGEYVTEIFKKVTTENGLWYVLRLAMPLLQRCQDTRDRHKQIFDIFNVARQLMNKLAELSEAGVEFVHQNEICDLLYHLKYTFIGDFLRRDAEASFSRLNPKMRERLKFFTSLQSSSSSSTAGSKHHDEDIVSKLSTSVRPEGVLSASVSAVGGVSSSSHLGSLSRTASDAGTVGMQSMQGMGMSSSNSSLMDMQLQSQTITSAQQHQALSSRNSGFINESMNGECVEPIAGCSNDLSNSDVKQCPWYWGDIKWKDAERLLLLCSNGTFLLRDSHSDRFLFTVSYKINEKVYHSRIRLNDGFVNVKGTNCAVRLLEQEIEKSRSGERHMLMHKRGAEAEASEVQLTQPLSRLQLLPSLQYLCRLHIRLHFHPVKQMPAALQRLSPKLRTYVSDSKFIIPDLNYCYEILKSHSFPSAMTTIFALSSGALPSAIAVFRVSGNRSLPILQQITRRAKWEPRRLQFVEIIDNRPAAAIAGNRQTSSLIDRAMAVYLPGPATFTGEDTAEIYIHGSRAVASALADRLSAIEDVRHAKRGEFSKRAFFNGKMDLHEVQGLQNLINAETQRQRIVAYSQMRGGHKAVQIRDELADLIGRTFVLMDFGEHVESRIEDVRKDIHPLVVKTEQLLQLARGAEIVHRGLRVVLCGRPNSGKSSLLNALANRSIAIVSELAGTTRDIVETRLEVAGIPVAFTDTAGIWQCDNVVEKEGIRRAKQKLTEADLILLVVEPEMSFAQLDELVDEIQENANEAAPWVLVQNKADLMNDRCNEIAAFEHRRIRNRVQTCALTSEGVGELSRTLESWIGELCPNEQQECLADHALLSCALDELVLAAEATDPAIMCDHLQAAMEAYAEMVGGRVTEQILDNIFSKLCIGK
Length2505
PositionTail
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.09
Grand average of hydropathy-0.075
Instability index49.02
Isoelectric point6.59
Molecular weight283321.13
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mitochondrial inner membrane	GO:0005743	IEA:InterPro
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GTP binding	GO:0005525	IEA:UniProtKB-KW
GTPase activity	GO:0003924	IEA:InterPro

GO - Biological Process
mitochondrial pyruvate transmembrane transport	GO:0006850	IEA:InterPro
tRNA modification	GO:0006400	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15270
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.96|      12|      22|     576|     587|       1
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  576-  587 (24.35/14.36)	H.PAFLAAAPAWK
  597-  609 (20.61/10.82)	HkPAYLPYRPELK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.66|      76|     572|     867|     986|       2
---------------------------------------------------------------------------
  900-  986 (118.00/141.49)	DTMARLVQTMEFDFSAKSFITLVVRTLQGAVCHQPLEGAresCyifYEILC..YRiPNIAIPV.........HARLYHIImqtiTAMITLPYTMPVEY
 1483- 1569 (124.66/65.02)	DLVDRLIQSSEFLTAPPAFCAQDWRFAEFPPATQTLYLA...C...IELMAspYK.PEIMVPAminylygrrHKRPYSVL....NAMALILTALPAIY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.64|      22|      25|    1813|    1834|       3
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 1787- 1807 (25.97/14.29)	.GVSSSSHLGSLSRTASDAGTV
 1813- 1834 (36.40/23.45)	QGMGMSSSNSSLMDMQLQSQTI
 1839- 1860 (35.27/22.46)	QHQALSSRNSGFINESMNGECV
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     478.64|     130|     572|    1617|    1767|       4
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 1617- 1749 (206.24/147.87)	MLQAFWQHSHMVSISKY.AGEYVTEIFKKVTTENGLWYVL.RLAMPLL.QRCQDTRD.RHKQIFDIFNVARQLMNKLAELSEAGVEFVHQN...EICDLLYHLKYTFIGDFLRRDAeASFSRLNPKMRERLKffTSLQSS
 2190- 2316 (172.87/111.47)	LINAETQRQRIVAYSQMrGGHKAVQIRDELADLIGRTFVLmDFGEHVE.SRIEDVR....KDIHPLVVKTEQLL.QLAR....GAEIVHRGlrvVLCGRPNSGKSSLLNALANRSI.AIVSELAGTTRDIVE..TRLEVA
 2352- 2437 (99.53/80.75)	LILLVVEPE..MSFAQL..DELVDEI.QENANEAAPWVLV.QNKADLMnDRCNEIAAfEHRRIRNRVQTCALTSEGVGELSRTLESWI..G...ELC...........................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.24|      30|      32|    1047|    1078|       5
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 1047- 1078 (50.48/36.18)	LH.FYFPPGKQLKPELMPygP.EEFKRASHIGLL
 1080- 1111 (43.76/24.24)	INpNYYSQTQEQQNNVVP..PsAEISRMFFISLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.04|      17|      21|    1311|    1328|       6
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 1311- 1328 (28.11/22.91)	DQCEpLTNRLNFYLQNVP
 1334- 1350 (33.93/21.83)	NQGE.FFRRLAEYHHNFP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     304.08|     102|     191|     234|     349|       7
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  234-  349 (150.34/114.71)	LGESRpsmqTAVGCLLVT.FGVFIMMSCktcdDKTRAL.TIIPKHLTWPLHPQICLLPANQAREQPNASSSE..REQS.IQQSLSQLSQQQHSgGTSASASLSNSayeSKTGIMrfRQAVI
  434-  540 (153.74/84.22)	LGLNR....TVHGLILTSdFSLYTPLNL....EKWRFIeECIPKLDYKGIQILIRTILINQFKDVPLVLSSEqmRQLTpIENMLLRLLDRENN.ALPAIFSMTEA...SRGSIV..RSANI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.68|      20|     572|     617|     636|       8
---------------------------------------------------------------------------
  617-  636 (37.06/23.30)	YML..LKQPRGKEYLSNIIRQV
 1190- 1211 (33.62/20.42)	YMLepLKQGRSPLTIFCIVHQV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     180.62|      54|     668|    1407|    1460|       9
---------------------------------------------------------------------------
 1407- 1460 (96.79/60.51)	PIMSTFSKLYRYHPSPIQFVYTILFTLHEHI.GNQERA....RNLTMHILAPSKSWSEE
 2077- 2135 (83.83/51.34)	PILQQITRRAKWEPRRLQFVEIIDNRPAAAIaGNRQTSslidRAMAVYLPGPATFTGED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     148.07|      47|    1047|     821|     876|      10
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  822-  875 (67.66/73.48)	NVYKNVKQAFAfWligPPNEelhFISYNRTVINKFAPIQTQYLDSLTMRAKNHV
 1126- 1172 (80.41/50.00)	ELFTAINQAYK.W...PASQ...FLSFPPEVYKLAQPESEEKIRDDEMKIKETV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15270 with Med23 domain of Kingdom Metazoa
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