<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15268

Description Uncharacterized protein
SequenceMVLLFCFYHLLLLIGTVNALRKVSIGLDQDVGDDAVGYQGYNDRQYYSMNNFDADNEQLVGDSLTNGEGDNDDNDHLSRSLQEDNWLDEFLSHTSTRAYPTHRRSKYYDRQHKKRKKRIKKIRIKRIRRKKKKQKANKSHKYNRRVIDEIDEMKLEAEEERIPETPAFIEETTTERIVSLDPIYDRETGNGYSTEDLDRKCEETKSIGRTFGITNISNFAGSNCGLIQLYYTDISCSQIQQFVEIMSQHQATQQFYQILNICSNSMYSVRKLRGKVLSLHEKLLPTEEGKPSIDKMSEEEKTKLAKEVDNMCKDLRDTYDNLESMSRQLPNEMPSLESLIRLKNIYAIEHSQELTDNPTLMIENMINSLNWNEANYQMYQYLAELGAIANRSTLSLLHRKRTSQMLPRPVQFTTKDSAVSCHQAHHAFESAYAHFKKEIQSKNIGLHTRELEKTPLSSLIEFKSHVSADKQIVFMLKFLFVISYGNIEQVIIIAPHEEWKYIEDGGQKRLDMRQQSRYEVYRRISNSANHVIATYIYNWSSGSPIFRWTQQSLQQIIIMCTKFKEIFDAKCRICRKTMKDFLPPTVILFELRNTKDIFAHETCK
Length604
PositionTail
OrganismDiploscapter pachys
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Nematoda> Chromadorea> Rhabditida> Rhabditina> Rhabditomorpha> Rhabditoidea> Rhabditidae> Diploscapter.
Aromaticity0.09
Grand average of hydropathy-0.667
Instability index55.35
Isoelectric point8.28
Molecular weight70667.53
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15268
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     386.95|     107|     121|     232|     343|       1
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  154-  214 (59.55/32.24)	......................................................KLEAEEERIPETPAFIEETTTERIVS..LDPIY.D.RETgngYST.EDLDRK.CEETKSIGRTFGIT
  232-  343 (169.78/122.57)	TDISCSQIQQFVEIMSQHQATQQFYQIL....NICSNSMYSVrkLRGKVLSlheKLLPTEEGKPSIDKMSEEEKTKLAKE..VDNMCKDLRDT...YDNLESMSRQLPNEMPSLESLIRLK
  355-  463 (157.62/101.08)	TDNPTLMIENMINSLNWNEANYQMYQYLaelgAIANRSTLSL..LHRKRTS...QMLPRPVQFTTKDSAVSCHQAHHAFEsaYAHFKKEIQS.....KNIGLHTREL..EKTPLSSLIEFK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.20|      26|      26|      31|      56|       2
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   31-   56 (48.70/34.83)	VGDDAVGYQGYNDRQYYSMNNFDADN
   60-   85 (45.50/32.05)	VGDSLTNGEGDNDDNDHLSRSLQEDN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15268 with Med27 domain of Kingdom Metazoa
Unable to open file!