<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15227

Description Uncharacterized protein
SequenceMASSGDPLAVAVAVRRDGRASRRAARWAAAAPGRVALVHVIPPLAFVPTPTGEQVPVERMAAGVVEMFSQDRRARAQDVFLPFRRLFGSKTVETVVLEGHSVAEALARYAAESGVRNLVLGSATLSWFRRILWLQDLPNTVLKAMPCSCNVFIVSRHRLTIKLVNQTQADNSNTYLKIESVSHREFALRLRSQLQDKQSLHDLPNVNTPKSSEVTSSDSSSQARSSLSFSASAAQSSESLRRRLFGRVCRKTPGRTGDTDFDAIGQLKEFPCVSLSSTEESRRIDEVAKPRKEYQDTPMMYVEACENHVHAKKKIQVLSNGCSEDLQKVQDALQQEDFFKQKAAPEKNKHFRATEEAEMVKKAFTREAYSKHNAETVTNMATTEKAKVLGALLSTGKSCRRYSRHEIELATENFSDAKKIGEGGYGIVYRCTLDHTEVAVKVIQQDSRGKIDEFFKEVDILGRLHHPNLVLLLGFCPEIGCLVYEYMENGSLEDQLIDNEGRQPLHWSLRFQIICEVARGLAFLHGTKPEPIVHRDLKPGNILLDKNYVSKIGDVGFAKLISDLAPDGFTEYRDDTVIAGTMYYMDPEYQLTGTVRPKSDLFALGIIILQLLTGKRPNGLILSAEEAIRKGTFPDILDISLNDWPIAEAEMLAKLGLHCTALRCRDRPDLEQEVLPELENILSRVTSSRKFRSPNAVVPSHFICPISQVKFST
Length713
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy-0.306
Instability index50.24
Isoelectric point8.39
Molecular weight79585.01
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15227
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     108.05|      25|      38|     218|     242|       1
---------------------------------------------------------------------------
  179-  202 (35.44/19.79)	ESVSHREFAL.RLR.SQLQDKQSLHD
  218-  242 (38.05/21.74)	DSSSQARSSL.SFSASAAQSSESLRR
  258-  283 (34.56/19.13)	DTDFDAIGQLkEFPCVSLSSTEESRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.84|      23|      49|     559|     606|       3
---------------------------------------------------------------------------
  559-  581 (38.16/68.21)	KLISDLAPDGFTEYRDDTVIAGT
  610-  632 (36.68/11.71)	QLLTGKRPNGLILSAEEAIRKGT
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15227 with Med32 domain of Kingdom Viridiplantae
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