<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15224

Description Uncharacterized protein
SequenceGGAGAGGEDGCGGGGDVLAGPEGARAGRLPPLPPPLRQQNRGDGGSGGAQRRGGAGQVRGGVRRPQPRARIRHLELVPEDIMAPRFAQYCLKSHAMFLQCIYRVAAQINYKTCESDSSRQYVLLYFSFFVTSLSVHFYHWNGKEHILFLNTCVFTDSNTYLKIESVSHREFALRLRSQLQDKQSLHDLPNVNTPKSSEVTSSDSSSQARSSLSFSASAAQSSESLRRRLFGRVCRKTPGRTGDTDFDAIGQLKEFPCVSLSSTEESRRIDEVAKPRKEYQDTPMMYVEACENHVHAKKKIQVLSNGCSEDLQKVQDALQQEDFFKQKAAPEKNKHFRATEEAEMVKKAFTREAYSKHNAETVTNMATTEKAKVLGALLSTGKSCRRYSRHEIELATENFSDAKKIGEGGYGIVYRCTLDHTEVAVKVIQQDSRGKIDEFFKEVDILGRLHHPNLVLLLGFCPEIGCLVYEYMENGSLEDQLIDNEGRQPLHWSLRFQIICEVARGLAFLHGTKPEPIVHRDLKPGNILLDKNYVSKIGDVGFAKLISDLAPDGFTEYRDDTVIAGTMYYMDPEYQLTGTVRPKSDLFALGIIILQLLTGKRPNGLILSAEEAIRKGTFPDILDISLNDWPIAEAEMLAKLGLHCTALRCRDRPDLEQEVLPELENILSRVTSSRKFRSPNAVVPSHFICPISQEIMDDPSVAADGHTYERRAIEAWFEKHTISPITKGMLPSLTIIPSHSLHEAIQQWKRSSR
Length753
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy-0.434
Instability index51.17
Isoelectric point7.39
Molecular weight84125.56
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15224
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.55|      20|      38|       1|      20|       1
---------------------------------------------------------------------------
    1-   20 (39.52/22.91)	GGAGAGGEDGCGGGGDVLAG
   42-   61 (39.03/22.53)	GDGGSGGAQRRGGAGQVRGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     108.05|      25|      38|     203|     227|       2
---------------------------------------------------------------------------
  164-  187 (35.44/22.15)	ESVSHREFAL.RLR.SQLQDKQSLHD
  203-  227 (38.05/24.31)	DSSSQARSSL.SFSASAAQSSESLRR
  243-  268 (34.56/21.41)	DTDFDAIGQLkEFPCVSLSSTEESRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.28|      18|      49|      85|     102|       3
---------------------------------------------------------------------------
   85-  102 (34.10/20.18)	RFAQYCLKSHAMFLQ.CIY
  117-  133 (20.50/ 9.59)	SSRQYVLLYFSFFVT.SL.
  136-  154 (29.69/16.75)	HFYHWNGKEHILFLNtCVF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.60|      25|      43|     382|     406|       4
---------------------------------------------------------------------------
  354-  370 (16.68/ 7.93)	.....YSKHNAETVT.NMATTEK..
  382-  406 (43.78/33.19)	KSCRRYSRHEIELATENFSDAKKIG
  426-  447 (34.14/24.20)	KVIQQDSRGKID...EFFKEVDILG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15224 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGAGAGGEDGCGGGGDVLAGPEGARAGRLPPLPPPLRQQNRGDGGSGGAQRRGGAGQVRGGVRR
1
64










Molecular Recognition Features






MoRF SequenceStartStop




1) ARAGRLPP
24
31