<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15207

Description Uncharacterized protein
SequenceGDRGGLRRDGAGDGGEHGGHRGEREQEQQARAQVGPRQVRARREGPLPDPACPPAPHHGAHANGQLHPGLASARRSSFGVQRRTGMASKEYVATVQEDCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVHSAASDRCETPRSISSSTVSSPSSTSLSSAPSESADRNGAAAVLFRQSSLLSQRDHALANINRSANRGASPSGSAGSEISYHADTNPVSNSHSITSVAQFSSSSSGDSVYRSFRRDSFPDTSDLQAAVSEVATNLEHSHDKDDLKLQIESMKVKLRHLQKLHECAHTEPVDSTQKLHNNLGIQRVADEVKLREIDLTEEMVRRLLRRMEREEEEAAEREAQPIQSSSEHKATEGDGDHQTAGEINTGLKSAGRCLTKYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALHRGNGTPPLAWYDRVRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLASKVGDVGLSTALLRHPGPGGGGGQQQSTMVRNTAPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAMETALEEDGDDSSFAEMLDAAAGEWPPEEARELALLALQCAEMRRKDRPGLHEHVLPALERIKGVAARAARETKALFLRSVSAAAAGAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSRSLIPNHSLRSAIMDWRSKNT
Length823
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.05
Grand average of hydropathy-0.485
Instability index51.16
Isoelectric point6.71
Molecular weight89279.95
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15207
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     270.08|      86|     458|      51|     182|       1
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   51-  143 (130.02/122.16)	ACPPAPHHGAHANGqlhPGLASARRSSFGVQRRTGMASKEYVAtvQEDCAQRQVEAEAVLLESDDVPAAISEEIDkfNIGKLVLGSSSRSIFR
  202-  287 (140.06/61.93)	SLSSAPSESADRNG...AAAVLFRQSSLLSQRDHALANINRSA..NRGASPSGSAGSEISYHADTNPVSNSHSIT..SVAQFSSSSSGDSVYR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.32|      31|      35|     532|     566|       2
---------------------------------------------------------------------------
  532-  566 (44.63/38.61)	HRgNGTPPLAWYDR...VRVAwEVATAVAFLHsaRPDP
  569-  602 (49.69/26.79)	HR.DLKPANILLDRnlaSKVG.DVGLSTALLR..HPGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.83|      30|      37|     695|     727|       4
---------------------------------------------------------------------------
  695-  727 (47.33/33.07)	ARELALLALQCAEMRRKDRPGlheHVL.PALERI
  735-  765 (46.50/25.07)	ARETKALFLRSVSAAAAGAPG...HFLcPILQEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.96|      30|      95|     312|     360|       5
---------------------------------------------------------------------------
  312-  341 (49.31/65.83)	EHSHDKDDLKLQIESMKVKLRHLQKLHECA
  362-  391 (45.65/21.54)	ADEVKLREIDLTEEMVRRLLRRMEREEEEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     110.44|      26|     285|     154|     179|       6
---------------------------------------------------------------------------
  154-  179 (43.86/35.65)	KISECIPSFCTAYVVSK....GKLSFVHSA
  441-  466 (39.43/31.17)	HIQAATSSFSSDLVIGK....GTYGTVYKA
  476-  503 (27.15/18.76)	KVLNSLEGFGTQQLQQElevlGKIRHPH..
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15207 with Med32 domain of Kingdom Viridiplantae
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