<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15206

Description Uncharacterized protein
SequenceGDRGGLRRDGAGDGGEHGGHRGEREQEQQARAQVGPRQVRARREGPLPDPACPPAPHHGAHANGQLHPGLASARRSSFGVQRRTGMASKEYVATVQEDCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVHSAASDRCETPRSISSSTVSSPSSTSLSSAPSESADRNGAAAVLFRQSSLLSQRDHALANINRSANRGASPSGSAGSEISYHADTNPVSNSHSITSVAQFSSSSSGDSVYRSFRRDSFPDTSDLQAAVSEVATNLEHSHDKLHNNLGIQRVADEVKLREIDLTEEMVRRLLRRMEREEEEAAEREAQPIQSSSEHKATEGDGDHQTAGEINTGLKSAGRCLTKYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHTVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMENGSLDDALHRGNGTPPLAWYDRVRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLASKVGDVGLSTALLRHPGPGGGGGQQQSTMVRNTAPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAMETALEEDGDDSSFAEMLDAAAGEWPPEEARELALLALQCAEMRRKDRPGLHEHVLPALERIKGVAARAARETKALFLRSVSAAAAGAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLPSRSLIPNHSLRSAIMDWRSKNT
Length789
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.05
Grand average of hydropathy-0.466
Instability index50.35
Isoelectric point6.67
Molecular weight85298.39
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15206
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     502.29|     128|     424|      51|     182|       1
---------------------------------------------------------------------------
   51-  178 (206.39/115.34)	ACPPAPHHGAHANGQLHPGLASARRSSFGVQRRTGMASKEYVATV.....QEDCAQRQVEAEAVLLESDDVPAAISEEIDKFNIGKLVLG..SSSRSIFRRKLKGS.KTATKISECIPSFCTAYVVSKGKLSFVHS
  202-  310 (143.02/77.10)	SLSSAPSESADRNG...AAAVLFRQSSLLSQRDHALANINRSA.......NRGASPSGSAGSEISYHADTNPVSNSHSIT..SVAQFSSS..SSGDSVYRSFRRDSfPDTSDLQAAVSEVATN.............
  313-  431 (152.89/85.02)	..........HSHDKLHNNL.GIQRVADEVKLREIDLTEEMVRRLlrrmeREE..EEAAEREAQPIQSSSEHKATEGDGDHQTAGEINTGlkSAGRCLTKYN...R.YSWEHIQAATSSFSSDLVIGKGTYGTVYK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.32|      31|      35|     498|     532|       2
---------------------------------------------------------------------------
  498-  532 (44.63/48.99)	HRgNGTPPLAWYDR...VRVAwEVATAVAFLHsaRPDP
  535-  568 (49.69/34.04)	HR.DLKPANILLDRnlaSKVG.DVGLSTALLR..HPGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.83|      30|      37|     661|     693|       4
---------------------------------------------------------------------------
  661-  693 (47.33/36.71)	ARELALLALQCAEMRRKDRPGlheHVL.PALERI
  701-  731 (46.50/27.83)	ARETKALFLRSVSAAAAGAPG...HFLcPILQEI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15206 with Med32 domain of Kingdom Viridiplantae
Unable to open file!