<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15181

Description Uncharacterized protein
SequenceNTNSACPAISPEFSPSSRASSSEPATRSRNTSTAAGRGITGTPSGPAAMEHRRWGTSGSGSRYSFRTSVSSLADIGGEIVEADQAGGELEASRAAADRVFVAVPGEVKHGKSALQWALQNVAKDGAQVVVAHVHRPAQMIPMMGAKMHYTRLDPEQVKDYRKQELEKASERLDEYVVLCTILKVSCEKIIIEKDDVAKGLEELIALHGITKLVMGAAADKHYSKKMKRPKSKTALRLMEAEASPCMIWFTCKGQLICTREANTTVPVIPASPASTVASTLSASSMSSHRRSITIHQSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQVFEPLELNVNARPTRTPLSSMDSWEEFGRRSQGSWYNLSRNDEVISVSESATQHPMHESDDEHFSSPFPELVTPGADAEMYGRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHETRQRKTIEETLVRQTQELEEMKIQCDTIYHQLCDAEEQKAMLEQRITEMESALREIEEKLDTSKYLLDALQADKEELQQERDAAITTAEELRQKGEQRTSMAAEALSTEFSAFELEQATRSFDEALKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCRETFGLVYEFLPNGSLDDRLVCANGTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGVCRLLTQSSTSTATTLYRTSTPKGTFAYMDPEFLSTGELTPRSDVYSLGIIILQLLTGRRPQKIAEAVEDAVEKRELHTVLDPSAGAWPFVQANQLTHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASSEASPDEASTPSYFVCPIFQEMMSDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLEHRELTPNRGLRSVILEWQQQHRQRYHEDWR
Length956
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.514
Instability index55.36
Isoelectric point6.00
Molecular weight106330.71
Publications
PubMed=23075845

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15181
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.49|      17|     192|     629|     665|       1
---------------------------------------------------------------------------
  590-  606 (33.69/31.33)	IG..EGGFGCVYK....GSLRST
  643-  665 (21.80/22.70)	IGscRETFGLVYEflpnGSLDDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     137.82|      38|      50|     417|     466|       2
---------------------------------------------------------------------------
  417-  457 (57.99/39.36)	LEEAL.RETQEskkEVFEESTKRRKAELD....LLSAL..QKAKELEK
  469-  506 (51.73/42.87)	IEETLvRQTQE.....LEEMKIQCDTIYH....QLCDAeeQKAM.LEQ
  511-  537 (28.11/ 8.22)	MESAL.R.......EI.EE.......KLDtskyLLDAL..QADKE...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     184.03|      45|      50|     755|     799|       3
---------------------------------------------------------------------------
  699-  747 (47.87/27.30)	..PHPVVHG..DLKPANillDanlVSKLGdFGVCRLLT.QSSTSTATTLYRTST
  755-  799 (72.78/45.30)	MDPEFLSTG..ELTPRS...D...VYSLG.IIILQLLTGRRPQKIAEAVEDAVE
  807-  849 (63.38/38.51)	LDP...SAGawPFVQAN...Q...LTHLG.LRCAEMSRRRRPD.LAREVWTVVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.84|      14|     168|      35|      51|       4
---------------------------------------------------------------------------
   35-   50 (21.94/17.85)	AGRGITGTPsgPAAME
  323-  336 (27.90/10.56)	HSRGAGGTP..PQVFE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.14|      15|     284|      15|      29|       8
---------------------------------------------------------------------------
   15-   29 (26.66/15.39)	PSSRASSSEPATRSR
  302-  316 (28.48/16.97)	PSSNGSPQQNLNRSR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15181 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LSRNDEVISVSESATQHPMHESDDEHFSSPFPELVTPGADAEMYGRLEEALRETQESKKEVFEES
2) NTNSACPAISPEFSPSSRASSSEPATRSRNTSTAAGRGITGTPSGPAAMEHRRWGTSGSGS
3) SMSSHRRSITIHQSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQVFEPLELNVNARPTRTPLSSMDSW
371
1
284
435
61
357










Molecular Recognition Features






MoRF SequenceStartStop




NANANA