<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15180

Description Uncharacterized protein
SequenceMRPEEVSDHRNLEWDKAGENMAKPARRDLEIDCEEVVIEMDDVAEGLAQLIAIHGITRLVMGAAADQHYSKEMKIPKSKTALKLMETAAPSCKIWFICDGHLICTREINENLPAISWSPVESTTTSSVCSISSQMRSMALKNEEASSKGYNSGPSFESQMGDWDFLFGDWEKTTYISSRTDDAVGTSGATTLPVIISDARQLRPVKHSPTYEADGVYLVPECNMEETLIVDEEVHFGHQEVYTVAELWKGHDESNKHQKAARNLLSALQRAKVSEDSYLHEVNQRKQIEEILTIQRLEIDEMKRRRYALHDELQDSKKQKLILEKHIIQTETATKDNVKEITDFFTEKSSKETKKCLKLEMDQLSALQKAREMENLYQNEKGQRLDMDAKITGQRVEIEETKKHRDELYYELKDLKEHMLRLKIIDVPEETNRRRRAERDLLSALEMVKGLEHRILREMRKRKAVEEANAIQSEEIQAMIRQLEDKNAKYMSDMKSALKFHEEELEKSKHFIQEIQAKYDKSLRERDTAVTEAKELWQKNKHGALVFSLSELQQATKCFDVALKIGEGGSGRVYKGFLRNTTVAIKLLHCQHLQGQQEFHQEVAFLSTVRHPNIMVFIGACQEASGSGLVHEFLPNGSLEEHISCKKKKNTPQLTWQMRTRIIGEIWSALMFIHSHKPLPIVHGDLKPDNILLDANFVSKLRICQVSKNPRATKNTKDPKFLTTGELTPQCDVYSFGIIILRLLTGRSLQNIIATVEKAMEKGHLHSIIDDSAGSWPYQQADQLARLGLRCANLSGKRRPDLIGGVWGVIEPLMKAASLNAGRPSFAASSDDTHTPSSFVCAISQEVMCDPQIAADGFTYEAEAIRRWLDSGHDTSPMTNLKLKHCNLTPNRALHSAILEWQQQQQKHGT
Length910
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.562
Instability index47.56
Isoelectric point6.36
Molecular weight103540.87
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15180
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.15|      39|     361|     491|     543|       1
---------------------------------------------------------------------------
  133-  172 (68.33/42.13)	SQMRSmALK.NEE..ASSKGY..NSGPSFESQMGDWDFLFGD....WEK
  492-  539 (47.82/73.61)	SDMKS.ALKfHEEelEKSKHFiqEIQAKYDKSLRERDTAVTEakelWQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     104.68|      28|      28|     265|     292|       2
---------------------------------------------------------------------------
  265-  290 (37.41/21.64)	.........................................LSALQRAKVSEDSYLHE...........VNQ...RKQIEE
  322-  352 (23.12/10.73)	IL......................................eKHIIQTETATKDN.VKE...........ITDfftEKSSKE
  364-  400 (24.87/12.06)	.........................................LSALQKAREMENLYQNEkgqrldmdakiTGQ...RVEIEE
  401-  467 (19.28/ 7.79)	TKkhrdelyyelkdlkehmlrlkiidvpeetnrrrraerdlLSALEMVKGLEHRILRE...........MRK...RKAVEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.06|      33|      56|     542|     580|       3
---------------------------------------------------------------------------
  542-  580 (43.10/44.68)	HGALVFsLSELQQAtkcfDVALKIG....EGGSGRVYKgFLRN
  600-  636 (54.96/33.59)	HQEVAF.LSTVRHP....NIMVFIGacqeASGSGLVHE.FLPN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15180 with Med32 domain of Kingdom Viridiplantae
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