<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15178

Description Uncharacterized protein
SequenceREANTTVPVIPASPASTVASTLSASSMSSHRRSITIHQSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQVFEPLELNVNARPTRTPLSSMDSWEEFGRRSQGSWYNLSRNDEVISVSESATQHPMHESDDEHFSSPFPELETPGADAEMYGRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHETRQRKTIEETLVRQTQELEEMKIQCDTIYHQLCDAEEQKAMLEQRITEMESALREIEEKLDTSKYLLDALQADKEELQQERDAAITTAEELRQKGEQRTSMAAEALSTEFSAFELEQATRSFDEALKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCRETFGLVYEFLPNGSLDDRLVCANGTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGVCRLLTQSSTSTATTLYRTSTPKGTFAYMDPEFLSTGELTPRSDVYSLGIIILQLLTGRRPQKIAEAVEDAVEKRELHTVLDPSAGAWPFVQANQLTHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASSEASPDEASTPSYFVCPIFQEMMSDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLEHRELTPNRGLRSVILEWQQQHRQRYHEDWR
Length698
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.591
Instability index57.06
Isoelectric point5.48
Molecular weight78535.14
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15178
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.66|      25|      57|     337|     361|       1
---------------------------------------------------------------------------
  337-  361 (44.91/32.92)	FGCVYK....GSLRSTTVAIKLLHPKSLQ
  392-  420 (42.75/30.97)	FGLVYEflpnGSLDDRLVCANGTPPLTWQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     149.02|      42|      50|     159|     208|       2
---------------------------------------------------------------------------
  159-  208 (60.07/63.30)	LEEAL.RETQESKKEVFEEstkrrkaELD....LLSALQKAKeLEKLYH.........H...ETRQR
  211-  243 (39.18/24.81)	IEETLvRQTQE.....LEE...............MK.IQ....CDTIYH.........QlcdAEEQK
  246-  298 (49.76/33.76)	LEQRI.TEMESALREI.EE.......KLDtskyLLDALQADK..EELQQerdaaittaE...ELRQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.37|      47|      56|      53|     104|       3
---------------------------------------------------------------------------
   53-  104 (66.47/52.82)	NLNRSrTEVMrHHSRGAGGTPPQVFEPLELNVNARPTRTPlsSMDSwEEFGR
  112-  158 (83.90/45.73)	NLSRN.DEVI.SVSESATQHPMHESDDEHFSSPFPELETP..GADA.EMYGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     184.03|      45|      49|     497|     541|       4
---------------------------------------------------------------------------
  441-  489 (47.87/30.93)	..PHPVVHG..DLKPANillDanlVSKLGdFGVCRLLT.QSSTSTATTLYRTST
  497-  541 (72.78/51.21)	MDPEFLSTG..ELTPRS...D...VYSLG.IIILQLLTGRRPQKIAEAVEDAVE
  549-  591 (63.38/43.56)	LDP...SAGawPFVQAN...Q...LTHLG.LRCAEMSRRRRPD.LAREVWTVVE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15178 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LSRNDEVISVSESATQHPMHESDDEHFSSPFPELETPGADAEMYGRLEEALRETQESKKEVFEEST
2) REANTTVPVIPASPASTVASTLSASSMSSHRRSITIHQSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQVFEPLELNVNARPTRTPLSSMDSWEE
113
1
178
101










Molecular Recognition Features






MoRF SequenceStartStop




NANANA