Description | Uncharacterized protein |
Sequence | MMMMIHNKWQPVAQPAASESSHRPHMRGQMRPLHAVPVPAAAAAVPPQASPSTTSLPVRPPQAQAQNMQINHKPSQQHPMAPVAQLRPCHPNAAAQIQAQPLSRHNNSTRMQQPVGFNHQAHMPLNAAAVPRTASTNWLPPTNTDQVQNMGINPMAGAQVQIQSMARHNSSGMRTQPPHTMSPRMNQEDFRVNQRQIYQAHGRRQSNVAASQIVGHFGGQNNQQFGHHPVEVDWREDMFQRITSLKRAHFSELVEFQRALRACAPDAMKDQFDKHEAFIYDIVRWCSLIKLRNAGKNVGLQLPSPQVVHITGATDCQQKLQEQPAAETLSSQSSENVPAATSPLVQQQENSHQLAGEEAVDDVVRREAEVPVVTNLTGGSTAPLTGGSGTCSQEKQQEHHPAHEAIPQLMQNANPAETPPAQQQTKRSLSPAELRSLAREMGVNLKRAFRHMRTPAGSIDDGDCMWFDEPSSVESCNKRRKTHDGALQDEITAAYSMLVETEIRITDDDHAGGADGAVVIELCYIPVSLTPELRAVVDPSEMSTKLLVPADYPRSSPVLLEDDDEQRKGIAAGVLDVEFRHAIGQLLEPRSIEGIAKAWDACVRRAVVQFAHGLGGGTFSTRHGRWESCIGAT |
Length | 633 |
Position | Tail |
Organism | Hordeum vulgare subsp. vulgare (Domesticated barley) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum. |
Aromaticity | 0.04 |
Grand average of hydropathy | -0.572 |
Instability index | 64.51 |
Isoelectric point | 6.65 |
Molecular weight | 69490.41 |
Publications | PubMed=23075845 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP15132 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 4| 331.75| 73| 74| 298| 370| 1 --------------------------------------------------------------------------- 139- 208 (87.12/42.30) ....LPptnTDQVQ.NMGINPM.A.GAQVQI.QSMA....RHNSSGMRTQP.PHTMSPRMNQEDfrvN.........Q......RQIYQAHG......R.......RQSNV 210- 296 (60.94/27.35) .........ASQIVgHFGGQNN....QQFGH.HPVEvdwrEDMFQRITSLK.RAHFSELVEFQR...AlracapdamK......DQFDKHEAfIYDIVRwcsliklRNAGK 298- 370 (118.18/60.05) VGLQLP...SPQVV.HITGATD.C.QQKLQE.QPAA....ETLSSQSSENV.PAATSPLVQQQE...N.........S......HQLAGEEA.VDDVVR.......REAEV 372- 444 (65.51/29.95) VVTNLT...GGSTA.PLTGGSGtCsQEKQQEhHPAH....EAIP.QLMQNAnPAETPPAQQQTK...R.........SlspaelRSLAREMG.VN................ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 97.19| 24| 25| 37| 60| 2 --------------------------------------------------------------------------- 29- 56 (36.74/15.67) QMRPlhavPV.PAAAAAV.....PPQASPSTTSL 57- 84 (28.72/10.54) PVRP......pQAQAQNMqinhkPSQQHPMAPVA 85- 111 (31.73/12.46) QLRP.chpNA.AAQIQAQ.....PLSRHNNSTRM --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) HRPHMRGQMRPLHAVPVPAAAAA 2) MMIHNKW | 22 3 | 44 9 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab