<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15063

Description Uncharacterized protein
SequenceVMGTSSFSVYVQIPKSKVAAGVHLQAKPYCQIFFTCKETLGCSREATQLCTKVESPRSSCASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSVSYPLSGLIADNVENTPAARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQVR
Length657
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.05
Grand average of hydropathy-0.495
Instability index41.87
Isoelectric point5.87
Molecular weight72951.85
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15063
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.27|      13|      21|      88|     100|       1
---------------------------------------------------------------------------
   64-   77 (17.55/ 7.35)	ISDQPeLTPRSVSL
   88-  100 (26.58/14.61)	IGQQP.LPRRSNSV
  112-  123 (18.12/ 7.80)	VENTP.AARR.QSI
  130-  142 (26.02/14.16)	TDQQP.LPRRSNSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     141.40|      32|      43|     259|     290|       3
---------------------------------------------------------------------------
  207-  245 (29.41/17.60)	....EEHQHSMVEihetfeqlhlvRNQLERSK....KEASEGRQKAE
  246-  277 (47.27/33.11)	RDLFESSMMFKAR...........ESSLRKEK....KEAEERLTREK
  278-  309 (44.92/31.07)	IDLEKEHLHVCNE...........LQKANEER....AELESKLLQTN
  310-  335 (19.80/ 9.26)	.ALMEELRQMQAE..............LEREKehavKEAEE......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.08|      36|      43|     385|     420|       4
---------------------------------------------------------------------------
  385-  420 (61.39/38.65)	GFLRHTTVAIKKFNREGTTGDKEFNDEVVETLS.RMR
  429-  465 (59.69/37.38)	GVCREAKALVFEFLSNGSLEDCLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      47|     471|     494|       6
---------------------------------------------------------------------------
  471-  494 (38.46/32.22)	DICTGLI..FLHSNKPKGiAHGDLKP
  517-  541 (38.47/26.87)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.21|      22|      28|     152|     177|       7
---------------------------------------------------------------------------
  152-  177 (34.48/26.06)	GSveimSAARR..QSIDMTPTGSSPSSS
  183-  206 (34.73/17.56)	GS....SLGLRdlDSMDGSPVPVSVASS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15063 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQ
2) ASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRS
3) HLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
4) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
118
61
224
312
222
97
279
344










Molecular Recognition Features






MoRF SequenceStartStop




NANANA