<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15060

Description Uncharacterized protein
SequenceLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMVKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQVRMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length590
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.576
Instability index39.05
Isoelectric point5.58
Molecular weight66455.43
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15060
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     184.60|      39|      43|     255|     293|       1
---------------------------------------------------------------------------
  153-  193 (44.34/24.77)	DLEKEHL.HVCNELQKANEERAELE.SKLlqtNALMEELR.QMQ
  217-  244 (31.20/15.40)	SV...FGPTSAVTLTEFSY...TEI.KEA...TDNFDD......
  255-  293 (63.09/38.14)	TVYKGFLRHTTVAIKKFNREGTTGD.KEF...NDEVETLS.RMR
  299-  338 (45.98/25.94)	TLI.GVCREAKALVFEFLSNGSLEDcLQG...EHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.86|      24|      47|     447|     475|       2
---------------------------------------------------------------------------
  447-  475 (38.46/35.53)	LPNEVEAalsndMLQDIIDTSAGE.WPPEY
  497-  521 (42.39/26.96)	LANEAWG.....ILQAMMNCPDDKcKPPTY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.39|      17|      28|      37|      53|       3
---------------------------------------------------------------------------
   37-   53 (30.80/18.10)	QSIDMTPTGSSPSSSQQ
   66-   82 (29.59/17.13)	DSMDGSPVPVSVASSEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      47|     344|     367|       4
---------------------------------------------------------------------------
  344-  367 (38.46/28.74)	DICTGLI..FLHSNKPKGiAHGDLKP
  390-  414 (38.47/23.98)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.71|      20|      31|      94|     113|       5
---------------------------------------------------------------------------
   94-  113 (34.80/26.28)	FEQLHLVRNQ...LERSKKEASE
  123-  145 (29.91/21.52)	FESSMMVKARessLRKEKKEAEE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15060 with Med32 domain of Kingdom Viridiplantae
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