<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15058

Description Uncharacterized protein
SequenceKTKYTAIISNCTVSMEKRKVPKSKVAAGVHLQAKPYCQIFFTCKETLGCSREATQLCTKVESPRSSCASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQEIMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length683
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.545
Instability index41.00
Isoelectric point6.02
Molecular weight76449.92
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15058
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.26|      38|      43|     348|     386|       1
---------------------------------------------------------------------------
  348-  386 (61.13/41.29)	TVYkGFLRHTTVAIKKFNREGTTGD.KEFNDEVETLS.RMR
  392-  431 (57.13/34.15)	TLI.GVCREAKALVFEFLSNGSLEDcLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      85.91|      23|      24|      71|      93|       2
---------------------------------------------------------------------------
   71-   92 (38.50/23.72)	.............ISDQPE.LTPR.....SVSLPPGHPGLL
   93-  117 (28.07/15.13)	G...........pIGQQP..L.PRrsnsnSVSYP..SPGLI
  119-  153 (19.34/ 7.93)	GsveimsaarrqsIDMTPTgSSPS.....SSQQSTGGSSL.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     147.66|      29|      30|     187|     215|       3
---------------------------------------------------------------------------
  178-  209 (43.30/21.77)	HSMveiHET......FEQLHL.VRNQ...LERSK....KEASEGRQ
  210-  241 (38.15/18.47)	KAE...RDL......FESSMM.FKARessLRKEK....KEAEERLT
  242-  266 (32.45/14.81)	REK...IDL.......EKEHLhVCNE...LQK........ANEERA
  267-  305 (33.77/15.66)	ELE...SKLlqtnalMEELRQ.MQAE...LEREKehavKEAEEMRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.48|      36|     427|      11|      51|       4
---------------------------------------------------------------------------
   11-   51 (55.89/51.38)	CT..VSMEKRKvPKSkVAagvHLQAKPYCQIF...FTCK.ETLGCSR
  439-  480 (53.59/33.10)	CTglIFLHSNK.PKG.IA...HGDLKPDNVLLdtsFVCKlADFGISR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.66|      39|      48|     530|     574|       5
---------------------------------------------------------------------------
  530-  574 (58.89/53.89)	RLLTGKSPlGLPNEVEAalsndMLQDIIDTSAGE.WPPEY.....TEELAR
  581-  625 (63.77/41.82)	RYERKQRP.NLANEAWG.....ILQAMMNCPDDKcKPPTYficpmTQEIMR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15058 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSNSVSYPSPG
2) EIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
3) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
67
122
279
115
246
311










Molecular Recognition Features






MoRF SequenceStartStop




NANANA