<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15057

Description Uncharacterized protein
SequenceMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQEIMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length560
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy-0.597
Instability index36.81
Isoelectric point5.47
Molecular weight63339.93
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15057
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     184.60|      39|      43|     225|     263|       1
---------------------------------------------------------------------------
  123-  163 (44.34/25.24)	DLEKEHL.HVCNELQKANEERAELE.SKLlqtNALMEELR.QMQ
  187-  214 (31.20/15.73)	SV...FGPTSAVTLTEFSY...TEI.KEA...TDNFDD......
  225-  263 (63.09/38.81)	TVYKGFLRHTTVAIKKFNREGTTGD.KEF...NDEVETLS.RMR
  269-  308 (45.98/26.43)	TLI.GVCREAKALVFEFLSNGSLEDcLQG...EHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.66|      39|      48|     407|     451|       2
---------------------------------------------------------------------------
  407-  451 (58.89/48.71)	RLLTGKSPlGLPNEVEAalsndMLQDIIDTSAGE.WPPEY.....TEELAR
  458-  502 (63.77/37.79)	RYERKQRP.NLANEAWG.....ILQAMMNCPDDKcKPPTYficpmTQEIMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      47|     314|     337|       3
---------------------------------------------------------------------------
  314-  337 (38.46/29.97)	DICTGLI..FLHSNKPKGiAHGDLKP
  360-  384 (38.47/25.01)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.64|      28|      31|      50|      80|       4
---------------------------------------------------------------------------
   50-   80 (44.41/32.17)	SEEHQHSMveiHETFEQLHLVRNQ...LERSKKE
   82-  112 (42.23/23.63)	SEGRQKAE...RDLFESSMMFKARessLRKEKKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.63|      14|      28|       7|      20|       5
---------------------------------------------------------------------------
    7-   20 (25.67/15.62)	QSIDMTPTGSSPSS
   36-   49 (24.96/15.00)	DSMDGSPVPVSVAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15057 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
2) MSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
156
1
188
123










Molecular Recognition Features






MoRF SequenceStartStop




NANANA