<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15056

Description Uncharacterized protein
SequenceMLFPLAMKQCRKVCKSMLLNSSPWIDRLACRRLGVFQAHGYTNPTPDCRWKGQARADQMVMKREIVKEFDEANIKFQHMLKELESARKQAYEEKCGREKAERDLFEAFQKARASENMYLGEVKQKNEIEEKLATVTEEVERLTETTDALDAKLREECKKRSALEKRTTHSDRIIKDLMLQLNKAVREVEALHAKKRESSATAEGTMHITELSSSEIKDATNNFDHSLKVGESVYGSVYKGFLRHTNVAIKKLNPESTQSQSQFNQEIEILSRVRHPNLVTLIGACKDAQALVYEYMPNGSLDDRLACKDNSKPLSWQLRIRIISHVCSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMFTDEFRDTTTLYRHTHPKGSFVYIDPEYVMTGDLTPLSDVYSFGIVLLRLLTGRPGFGLLKDVQQAVEKGCLEAILDSSAGDWPAMQAEQLARVGLKCCEIRRKNRPDLQKGVWTVLEPMLKPASIMMCSLSFKSVSEDLGGVPPYFICPILQDVMREPLIAADGFTYEAEAIREWIDSGHHTSPMTNLELLHGDLLPNHALRSAIQEWLQTDAQ
Length584
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy-0.395
Instability index42.21
Isoelectric point7.01
Molecular weight66145.22
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15056
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     130.38|      33|      34|     128|     160|       2
---------------------------------------------------------------------------
   64-   88 (21.49/10.89)	.........EIV........KEFDEANIKFQ.HMLKE....lESARK
   91-  125 (35.09/22.48)	YEEKCGR..EKA........ER..DLFEAFQkARASEnmylgEVKQK
  128-  160 (49.71/34.94)	IEEKLATVTEEV........ERLTETTDALD.AKLRE.....ECKKR
  163-  197 (24.08/13.09)	LEKR.TTHSDRIikdlmlqlNKAVREVEALH.AKKRE..........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.38|      27|      28|     446|     473|       3
---------------------------------------------------------------------------
  446-  473 (43.68/32.87)	DSSAGDWPAMQAeQLARVGLKCCEIRRK
  477-  503 (47.71/31.27)	DLQKGVWTVLEP.MLKPASIMMCSLSFK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15056 with Med32 domain of Kingdom Viridiplantae
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