<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15055

Description Uncharacterized protein
SequenceLVMGTSSFSVKRKVPKSKVAAGVHLQAKPYCQIFFTCKETLGCSREATQLCTKVESPRSSCASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSVSYPLSGLIADNVENTPAARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQEIMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length717
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.528
Instability index43.34
Isoelectric point5.96
Molecular weight80062.86
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15055
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.27|      13|      21|      89|     101|       1
---------------------------------------------------------------------------
   65-   78 (17.55/ 7.52)	ISDQPeLTPRSVSL
   89-  101 (26.58/15.12)	IGQQP.LPRRSNSV
  113-  124 (18.12/ 7.99)	VENTP.AARR.QSI
  131-  143 (26.02/14.65)	TDQQP.LPRRSNSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      64.17|      11|      19|     277|     287|       2
---------------------------------------------------------------------------
  277-  287 (17.19/ 9.95)	EKIDLEKEHLH
  298-  308 (16.02/ 8.77)	ERAELESKLLQ
  309-  318 (13.72/ 6.48)	TN.ALMEELRQ
  319-  329 (17.23/ 9.99)	MQAELEREKEH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.10|      24|      28|     153|     180|       3
---------------------------------------------------------------------------
  153-  180 (37.67/29.20)	GSveimSAARR..QSIDMTPTGSSPSSSQQ
  184-  209 (37.43/20.01)	GS....SLGLRdlDSMDGSPVPVSVASSEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     150.72|      38|      43|     382|     420|       5
---------------------------------------------------------------------------
  346-  376 (40.20/16.62)	.....FGPTSAVTLTEFSY...TEI.KEATDNFDDSK.KIG
  382-  420 (58.60/30.28)	TVYkGFLRHTTVAIKKFNREGTTGD.KEFNDEVETLS.RMR
  426-  465 (51.92/23.30)	TLI.GVCREAKALVFEFLSNGSLEDcLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.66|      39|      48|     564|     608|       6
---------------------------------------------------------------------------
  564-  608 (58.89/49.98)	RLLTGKSPlGLPNEVEAalsndMLQDIIDTSAGE.WPPEY.....TEELAR
  615-  659 (63.77/38.76)	RYERKQRP.NLANEAWG.....ILQAMMNCPDDKcKPPTYficpmTQEIMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      47|     471|     494|       7
---------------------------------------------------------------------------
  471-  494 (38.46/33.27)	DICTGLI..FLHSNKPKGiAHGDLKP
  517-  541 (38.47/27.74)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15055 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQ
2) ASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRS
3) HLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
4) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
119
62
225
313
223
98
280
345










Molecular Recognition Features






MoRF SequenceStartStop




NANANA