<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15054

Description Uncharacterized protein
SequenceCFLSFFREATQLCTKVESPRSSCASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSVSYPLSGLIADNVENTPAARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQVR
Length619
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.05
Grand average of hydropathy-0.534
Instability index43.37
Isoelectric point5.63
Molecular weight68960.20
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15054
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.27|      13|      21|      51|      63|       1
---------------------------------------------------------------------------
   27-   40 (17.55/ 6.37)	ISDQPeLTPRSVSL
   51-   63 (26.58/12.78)	IGQQP.LPRRSNSV
   75-   86 (18.12/ 6.77)	VENTP.AARR.QSI
   93-  105 (26.02/12.38)	TDQQP.LPRRSNSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      50.45|      11|      19|     239|     249|       2
---------------------------------------------------------------------------
  239-  249 (17.19/ 8.87)	EKIDLEKEHLH
  260-  270 (16.02/ 7.81)	ERAELESKLLQ
  281-  291 (17.23/ 8.91)	MQAELEREKEH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     150.72|      38|      43|     344|     382|       4
---------------------------------------------------------------------------
  308-  338 (40.20/20.08)	.....FGPTSAVTLTEFSY...TEI.KEATDNFDDSK.KIG
  344-  382 (58.60/36.55)	TVYkGFLRHTTVAIKKFNREGTTGD.KEFNDEVETLS.RMR
  388-  427 (51.92/28.13)	TLI.GVCREAKALVFEFLSNGSLEDcLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.86|      24|      47|     536|     564|       5
---------------------------------------------------------------------------
  536-  564 (38.46/33.62)	LPNEVEAalsndMLQDIIDTSAGE.WPPEY
  586-  610 (42.39/25.51)	LANEAWG.....ILQAMMNCPDDKcKPPTY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.98|      25|      29|     115|     143|       6
---------------------------------------------------------------------------
  115-  143 (40.18/34.70)	GSveimSAARR..QSIDMTPTGSSPSSS...QQS
  146-  175 (35.80/21.15)	GS....SLGLRdlDSMDGSPVPVSVASSeehQHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      45|     433|     456|       8
---------------------------------------------------------------------------
  433-  456 (38.46/33.00)	DICTGLI..FLHSNKPKGiAHGDLKP
  479-  503 (38.47/27.54)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15054 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQ
2) CASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRS
3) HLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
4) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
81
23
187
275
185
60
242
307










Molecular Recognition Features






MoRF SequenceStartStop




NANANA