<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15048

Description Uncharacterized protein
SequenceSCASTISDQPELTPRSVSLPPGHPDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQEIMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length610
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.587
Instability index40.84
Isoelectric point5.47
Molecular weight68548.66
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15048
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.26|      38|      43|     275|     313|       1
---------------------------------------------------------------------------
  275-  313 (61.13/46.76)	TVYkGFLRHTTVAIKKFNREGTTGD.KEFNDEVETLS.RMR
  319-  358 (57.13/38.67)	TLI.GVCREAKALVFEFLSNGSLEDcLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.45|      27|      30|      46|      74|       2
---------------------------------------------------------------------------
   46-   74 (43.07/34.23)	GSVeiMSAARRQSIDMTPTGSSPSSS...QQS
   77-  106 (40.38/25.44)	GSS..LGLRDLDSMDGSPVPVSVASSeehQHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     143.19|      29|      30|     114|     142|       3
---------------------------------------------------------------------------
  114-  142 (48.70/29.24)	FEQLHL.VRNQ...LERSK....KEASEGRQKAERDL
  143-  174 (39.10/22.16)	FESSMM.FKARessLRKEK....KEAEERLTREKIDL
  175-  199 (28.25/14.17)	.EKEHLhVCNE...LQK........ANEERAELESKL
  206-  232 (27.16/13.36)	MEELRQ.MQAE...LEREKehavKEAEEMRQ......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.66|      39|      48|     457|     501|       4
---------------------------------------------------------------------------
  457-  501 (58.89/57.90)	RLLTGKSPlGLPNEVEAalsndMLQDIIDTSAGE.WPPEY.....TEELAR
  508-  552 (63.77/44.96)	RYERKQRP.NLANEAWG.....ILQAMMNCPDDKcKPPTYficpmTQEIMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      45|     364|     387|       5
---------------------------------------------------------------------------
  364-  387 (38.46/30.40)	DICTGLI..FLHSNKPKGiAHGDLKP
  410-  434 (38.47/25.35)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.96|      12|      16|       8|      20|       6
---------------------------------------------------------------------------
    8-   20 (20.32/17.96)	DQPELtPR...SVSLP
   25-   39 (20.65/12.34)	DQQPL.PRrsnSVSYP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15048 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
2) SCASTISDQPELTPRSVSLPPGHPDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
206
1
238
173










Molecular Recognition Features






MoRF SequenceStartStop




NANANA