<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15042

Description Uncharacterized protein
SequenceVMGTSSFSVYVQIPKSKVAAGVHLQAKPYCQIFFTCKETLGCSREATQLCTKVESPRSSCASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRSNSVSYPLSGLIADNVENTPAARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQLHLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKIDLEKEHLHVCNELQKANEERAELESKLLQTNALMEELRQMQAELEREKEHAVKEAEEMRQTIGNSVFGPTSAVTLTEFSYTEIKEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHPREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDTSFVCKLADFGISRPLDVTNTTITPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKQRPNLANEAWGILQAMMNCPDDKCKPPTYFICPMTQEIMRDPHIAADGFTYEGDAIKDWFQRGHKMSPMTYLSFTHHELIPNTALRFAIQEWQMQQQP
Length716
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy-0.518
Instability index42.68
Isoelectric point5.78
Molecular weight79941.63
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15042
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      88.27|      13|      21|      88|     100|       1
---------------------------------------------------------------------------
   64-   77 (17.55/ 7.36)	ISDQPeLTPRSVSL
   88-  100 (26.58/14.76)	IGQQP.LPRRSNSV
  112-  123 (18.12/ 7.82)	VENTP.AARR.QSI
  130-  142 (26.02/14.30)	TDQQP.LPRRSNSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      64.17|      11|      19|     276|     286|       2
---------------------------------------------------------------------------
  276-  286 (17.19/ 9.82)	EKIDLEKEHLH
  297-  307 (16.02/ 8.67)	ERAELESKLLQ
  308-  317 (13.72/ 6.41)	TN.ALMEELRQ
  318-  328 (17.23/ 9.86)	MQAELEREKEH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.10|      24|      28|     152|     179|       3
---------------------------------------------------------------------------
  152-  179 (37.67/34.52)	GSveimSAARR..QSIDMTPTGSSPSSSQQ
  183-  208 (37.43/23.76)	GS....SLGLRdlDSMDGSPVPVSVASSEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     150.72|      38|      43|     381|     419|       5
---------------------------------------------------------------------------
  345-  375 (40.20/22.99)	.....FGPTSAVTLTEFSY...TEI.KEATDNFDDSK.KIG
  381-  419 (58.60/41.65)	TVYkGFLRHTTVAIKKFNREGTTGD.KEFNDEVETLS.RMR
  425-  464 (51.92/32.11)	TLI.GVCREAKALVFEFLSNGSLEDcLQGEHPREPLSwRMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.66|      39|      48|     563|     607|       6
---------------------------------------------------------------------------
  563-  607 (58.89/54.96)	RLLTGKSPlGLPNEVEAalsndMLQDIIDTSAGE.WPPEY.....TEELAR
  614-  658 (63.77/42.63)	RYERKQRP.NLANEAWG.....ILQAMMNCPDDKcKPPTYficpmTQEIMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.93|      23|      47|     470|     493|       7
---------------------------------------------------------------------------
  470-  493 (38.46/32.09)	DICTGLI..FLHSNKPKGiAHGDLKP
  516-  540 (38.47/26.73)	DVTNTTItpYHRTNQIKG.TMGYMDP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15042 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ARRQSIDNLLVSTDQQPLPRRSNSVSYPSPGLIAGSVEIMSAARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSMVEIHETFEQ
2) ASTISDQPELTPRSVSLPPGHPGLLGPIGQQPLPRRS
3) HLVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEAEERLTREKID
4) MEELRQMQAELEREKEHAVKEAEEMRQTIGNSV
118
61
224
312
222
97
279
344










Molecular Recognition Features






MoRF SequenceStartStop




NANANA