<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15035

Description Uncharacterized protein
SequencePEPPPPRPRPRPPPAAPHQHEKLRTPKSKKAVTVQRKANPSCRIWFVCKGNLICTREVSEELNRGEPSTASTSPRSVASDYSRSKSSPPRLTLHGDCDGDGELFGLQHDSRDPMMAASLRRTPSRDDSDNAEDHSVEDFGHEGAAEGGSSAVVHSLQDVDEDPPTPSHDGSEEEAGDMEDALYEKLKDAITEAGSLRHEAYEETRRRQKADRDLADASRMAREAESSYHGEARRRKEMEESLTRERAAMEQERRELDAILEKIRAVDDRSAELELQITDSGRVMSELDVRMSESCSVLDALRRGRRGEDPAADEESMPAVDGGNQDVSFLRLGLSELEEATDRFHESAMIGGAGAGSRGRVYRGSLRGMSVAVKMICPDVAVDEARFGRAVDAIARARHPHIVSLVGACPEARAVVHELVPGGSLEDRLAGKAPPLPWHARCGVAYRTCSALAYLHSTATVHGDVRPANILLDDERCSSSKLAGLGMPGLVVPPQLPSGVALAYVDPRYLATGELTPQCDVHALGVVLLRLVTGMPAFAAKKAAQKAAEGSTPWHEVVDASAGGWPMERATEVALLGLKCCDAVETGGPRRAGELLDEALGVLEAATNATPGRTWSSLSASTASDSGGAPSYFLCPILKEVMRDPQIAGDGFTYEAGAMKEWLGSGHDTSPMTNLKLPTDELMPNHALRAAIQEWRHTRPSTFHRHL
Length707
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.04
Grand average of hydropathy-0.536
Instability index52.60
Isoelectric point5.49
Molecular weight76440.70
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15035
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.51|      27|      57|     434|     462|       1
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  434-  462 (46.89/32.83)	PP.LPwhARCGVAYRTCSALA..YLHSTATVH
  493-  522 (42.62/22.34)	PPqLP..SGVALAYVDPRYLAtgELTPQCDVH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     128.99|      25|      26|     201|     225|       2
---------------------------------------------------------------------------
  201-  225 (38.34/18.92)	YEETR....RRQKADRDLADASRMAREAE
  229-  252 (37.60/18.42)	HGEAR....RRKEMEESLT.RERAAMEQE
  260-  288 (29.48/12.91)	LEKIRavddRSAELELQITDSGRVMSELD
  298-  317 (23.57/ 8.88)	LDALR....RGRRGEDPAADEESM.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.95|      29|      61|     537|     566|       4
---------------------------------------------------------------------------
  537-  566 (48.43/30.94)	AFAAKKAAQKAAEGSTpWHEVVDASA...GGWP
  599-  630 (45.53/24.11)	ALGVLEAATNATPGRT.WSSLSASTAsdsGGAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.59|      10|      57|      98|     112|       7
---------------------------------------------------------------------------
   98-  109 (15.48/20.67)	DGDGELFGlqHD
  133-  142 (20.11/ 6.77)	DHSVEDFG..HE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15035 with Med32 domain of Kingdom Viridiplantae
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