<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP15033

Description Uncharacterized protein
SequenceMGAAADRGYTRKLRTPKSKKAVTVQRKANPSCRIWFVCKGNLICTREVSEELNRGEPSTASTSPRSVASDYSRSKSSPPRLTLHGDCDGDGELFGLQHDSRDPMMAASLRRTPSRDDSDNAEDHSVEDFGHEGAAEGGSSAVVHSLQDVDEDPPTPSHDGSEEEAGDMEDALYEKLKDAITEAGSLRHEAYEETRRRQKADRDLADASRMAREAESSYHGEARRRKEMEESLTRERAAMEQERRELDAILEKIRAVDDRSAELELQITDSGRVMSELDVRMSESCSVLDALRRGRRGEDPAADEESMPAVDGGNQDVSFLRLGLSELEEATDRFHESAMIGGAGAGSRGRVYRGSLRGMSVAVKMICPDVAVDEARFGRAVDAIARARHPHIVSLVGACPEARAVVHELVPGGSLEDRLAGKAPPLPWHARCGVAYRTCSALAYLHSTATVHGDVRPANILLDDERCSSSKLAGLGMPGLVVPPQLPSGVALAYVDPRYLATGELTPQCDVHALGVVLLRLVTGMPAFAAKKAAQKAAEGSTPWHEVVDASAGGWPMERATEVALLGLKCCDAVETGGPRRAGELLDEALGVLEAATNATPGRTWSSLSASTASDSGGAPSYFLCPILKEVMRDPQIAGDGFTYEAGAMKEWLGSGHDTSPMTNLKLPTDELMPNHALRAAIQEWRHTRPSTFHRHL
Length697
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.04
Grand average of hydropathy-0.491
Instability index49.53
Isoelectric point5.42
Molecular weight75251.36
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP15033
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.94|      24|      26|     191|     215|       1
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  191-  215 (35.86/20.45)	YEETRRRQKADRDLAdASRMAREAE
  219-  242 (41.08/19.70)	HGEARRRKEMEESLT.RERAAMEQE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.18|      21|      28|     114|     141|       2
---------------------------------------------------------------------------
  114-  138 (28.97/27.25)	SRDDSDnaEDHSVEdfGHEGA.AEGG
  145-  166 (35.21/13.11)	SLQDVD..EDPPTP..SHDGSeEEAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.05|      13|      27|     291|     303|       3
---------------------------------------------------------------------------
  291-  303 (23.23/12.57)	LRRGRRGEDPAAD
  320-  332 (20.82/10.48)	LRLGLSELEEATD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.40|      25|     113|     405|     429|       4
---------------------------------------------------------------------------
  405-  429 (47.62/27.79)	VVHELVPG..GSLEDRLAGKAP..PLPWH
  517-  545 (33.78/17.65)	VLLRLVTGmpAFAAKKAAQKAAegSTPWH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.80|      27|     121|     438|     464|       9
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  438-  464 (48.15/30.26)	TCSALAYLHSTATVH.GDVRPANILLDD
  561-  588 (43.65/26.71)	TEVALLGLKCCDAVEtGGPRRAGELLDE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP15033 with Med32 domain of Kingdom Viridiplantae
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