Description | ATP-dependent DNA helicase |
Sequence | MPKTKKCLEDIDRFIRENHHKECGIIYCLSRMDCEKVAEKLREYGHQASHYHGNMEPFDRTQVQRLWSMDKINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMITQGSAEQVRSSSSSSHGQALATHKENLLCMVSYCENDVDCRRLLQLIHFGETFDPSHCAKTCDNCKKGLRWIEKDVTNIAKQLVELVLATGQPCSSSHILEVYRGSLNQNVKKNRHDMLPLHGAGKHLAKGEAARVLRNLVTEGILAEDVKKSDTYGSVSSVLKVNQVKVGGLRSGNQIVLKFPTPDKAPKMGKLDESSISQVNKPVQRQSEMDENFSSLLYETLRILRSQIAEAAGCGVHHIFNNETLKEISTRVPRTKEELLEINGIGKVKLNKYGDRVLATLEEFLNQFSSGSKRSSSSGGSNEQNEAVKKRRGFTAIDTSGNGNDFEERTVQSKKHAGKTQNSKQGIADAASVIQDIRYIDVDLDGCEDVDEELCSSVQQPVASGRVLPKWSAGGNAPPPNIFEEFKYTN |
Length | 551 |
Position | Unknown |
Organism | Hordeum vulgare subsp. vulgare (Domesticated barley) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.577 |
Instability index | 46.88 |
Isoelectric point | 8.43 |
Molecular weight | 61533.94 |
Publications | PubMed=23075845 |
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:InterPro ATP binding GO:0005524 IEA:UniProtKB-KW hydrolase activity GO:0016787 IEA:UniProtKB-KW nucleic acid binding GO:0003676 IEA:InterPro |
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro DNA repair GO:0006281 IEA:InterPro DNA replication GO:0006260 IEA:InterPro |
Binary Interactions |
Repeats | >MDP14880 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 335.26| 108| 142| 20| 161| 1 --------------------------------------------------------------------------- 32- 148 (175.59/193.76) MDCEKVAeKLREYGHQASHYHgNMEPFDRTQVQRLW.SMDKINIICATVAFGMGINKP....DVRFVIHHSLPKSI.EGYHQECGRAGrDGQrsscvlYYNYSDYIRV.KHMITQG.SAEQVRSS 175- 290 (159.68/101.54) VDCRRLL.QLIHFGETFDPSH.CAKTCDNCKKGLRWiEKDVTNIAKQLVELVLATGQPcsssHILEVYRGSLNQNVkKNRHDMLPLHG.AGK......HLAKGEAARVlRNLVTEGiLAEDVKKS --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) PNIFEEFKYTN 2) RVLPKW | 541 527 | 551 532 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab