<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14861

Description Uncharacterized protein
SequenceLAARLASPALLLAILSSRVIPQRVARPTAYRLYLELLRRHGFKLCFQMKAANSNKIRQLIDDNLNLSKIFGFSACEPGVFIVELVLCILWQLVDTALDDESLLELTPEKKAQWPTRPQDISAFEVSFPEQKPEKIEKLQRMNSVITIELIGHLLHNKVITRILSLARENMQTQWGLFTYRLQLLVANSSTLQASTMSLQAFQQLILDDHNVHGENKHSLHKKFHPMVASNPLSSPNGHCLGGSYSALWIPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIEGPVPHLETRLCMLLSIATLAVADIIEEADSRRGETDLSSHWKQKTASDDLRKELMLSLQALGDYESLLVPPPCIISAANQAASKAAMLVSGINSSSGYMESINETGNMRHLIVESCISRNLLDTSAYYWPGYINGHVNSMSHAIPSQLAGWAAFMKGTPLTQSLVRVLVSSPASSLAELEKLFEVAVNGSDDDKVSAATVLCGATLLRGWNFQEHTVRLVVKLLSHSDPADYAGRESQLIKHGPMLNVILTGISPVDYAPIFSFHGLVPELATVLMAICEVYGCLSPSVSWTLGAGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLTASSSSKSRSSQKQLPVTSSRSSQNPIFMDSFPKLKLWYRQHQACLASTLSGLAHGTPVHNIVDSLLNLMFTKANKGSTSIGSVSGSSSISNSSGPGGDDSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASTATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGIDVPRLATGGTTLGRLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLVFSASRTVFYHNNDAVVQLLRSCFTSILGMSSTSLCCCGGVASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVSRHGSDKLKRTKYAMGHGQISLATAMTQVKVAASLGATLVWLSGGTTLVQSLFQEILPSWFLSVQDLDRGGDSGGMVYRLGGHALAYFAVYAGMFAWGIDPTAVSRRRERVMGLHLEFLASALDGKISLGCNMFLWRAYVSGFLELVVDRVHCLLHEVDLKVLKKLSIGLRQWKEKELAVAILCRGGPEAMGVAAELILDSEW
Length1241
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy0.163
Instability index44.21
Isoelectric point6.98
Molecular weight135325.96
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14861
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.53|      30|     586|     623|     654|       1
---------------------------------------------------------------------------
  623-  654 (52.70/47.20)	LRLWKfnHPPLEYCIMGDGAPVGSQLTPEYLL
 1208- 1237 (51.83/38.16)	LRQWK..EKELAVAILCRGGPEAMGVAAELIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.38|      12|     586|     112|     131|       2
---------------------------------------------------------------------------
   99-  110 (20.45/19.20)	DESLLELT.PEKK
  119-  131 (16.92/ 6.69)	DISAFEVSfPEQK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.98|      33|     586|     395|     427|       3
---------------------------------------------------------------------------
  365-  408 (45.29/24.77)	MLSLQALGDYESLLVpPPCI.isaanqaaskAAMLVSG.INSSSGY
  409-  453 (49.69/27.85)	MESINETGNMRHLIV.ESCIsrnlldtsayyWPGYINGhVNSMSHA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.38|      43|     367|     461|     518|       4
---------------------------------------------------------------------------
  463-  518 (58.99/66.24)	AFMKGTPLTqslvrvlvsSPASSLAELEKLFE..VAVNGSDDDKVsaATvlCGATLLR
  833-  877 (75.39/43.44)	AFMNGTDWP.........SPAANLSMVEEHIKkiVAATGIDVPRL..AT..GGTTLGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.62|      14|      16|     965|     980|       7
---------------------------------------------------------------------------
  965-  979 (25.38/17.96)	SILGMSSTSlCCCGG
  982-  995 (29.24/11.79)	SLLGHGFGS.HCSGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.14|      19|     617|     259|     300|       8
---------------------------------------------------------------------------
  232-  250 (37.36/41.13)	LSSPNGHCLGGSYSALWIP
  279-  297 (35.77/14.09)	LQAVNRSSWHDAFMALWIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.18|      41|     367|     706|     746|      10
---------------------------------------------------------------------------
  706-  746 (70.48/38.46)	ACLASTLSGLAHGTP.VHNIVDSLLNLMFTKA...NKGSTSIGSV
 1071- 1115 (63.69/34.10)	ASLGATLVWLSGGTTlVQSLFQEILPSWFLSVqdlDRGGDSGGMV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     161.64|      49|     215|     535|     585|      11
---------------------------------------------------------------------------
  535-  585 (82.44/63.25)	SHSDPADYAGRESQLIKHGPMLNvILTGIsP..VDYAPIFSFHG.LVP.ELATVL
  751-  803 (79.20/51.73)	SISNSSGPGGDDSHLWPQLPAWE.ILEAV.PfvVDAALTACSHGrLFPrELATGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.78|      14|      16|    1000|    1014|      12
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 1000- 1014 (22.03/19.48)	APGILYLRIFrCIKD
 1019- 1032 (22.76/14.12)	AEDILSLLML.SVKD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14861 with Med33 domain of Kingdom Viridiplantae
Unable to open file!