<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14850
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | QVPLLYYCQQLASTLSSHETCFTQTGDSLFFMHEGLQHARAPIFDVSSAIEVIHTGSYRRLPKSVEEIGTQNTLFQDERMPTLKKLSTLVRAKLLETLVPKEISEVLVADGIANVQVDGEFKVLLTLGYRGHFSLWRILHIELLVGEKTGPIKLEETRRYVLGDDIERRMAVADNPFTILYTILHELCISFVMDTVIRQTNVLRQGRWKEAIKSELVSDSHRSAGQGGNNAPTQLGQDGELDSSGLKIPGLKVNYWLDERNSGSAESDSSPFIKVEALQDMQIKCQHSSFVLDPLTDKEADLSLDLSCIDVEALILKAIACNIHTRLLEIQRELKKNTQISRSPSDVVLKQKEVHMDVLQKRVDRRGFENCCTNEVLQVRAYGKSYIHLGINIRSGGFLLQSPKNILPPSAVLDSEEALNKRSITPPEVFVSLKTRSILHLLAATGRFLGLKVYSECQITLKIPKSILYGSDFMVMGFPWGTNVYYLLMQLDDNLMPVFYLLEVHTDGEDRSNIDTTTDAKEVVRFNRIDIGQMQLGEDECSANLLDVEKLQVLQSKLNQQSMEDRSPRQSGIDESLPLKHSFSSVVNTVLGYEQDSPSKENRLPYSSPSIHLSPQEVGHQGDSSRAGPPELDDDLLRSNTDTAKLASGVTLDSYLLSNSKSAFSTDTTSSDPAGLENISTLRSEVPSRKRYLSEFLLNIPSLQRSIIDGGPRKRRKLLEDASNVQSRTTLTYGTILKEGNCCITENIYASVLLQVIKHCSLCIKYAQLTTQMNSLDIPYVEEVGLGTPSSSLWLRLPFAQDGSWKHTCLRLGKAGSMSWSVRINDPYYGALWKLHGGSNTTEWGSVRIANTCEMDSHIYFDYDGIILTYNSVEADSIQRLVLELRRLLNARVFACGMRRLIRVNVDEKLVENQVARRAKLHSARKGFRNRLSDQTAKTFRINAVGLMNLWFSYGANAMTMVHFVVEWEADKVGCTMRISPDHLWPHTKFLEDFVNCNEVASFLDCIRLTTGPLLSLGGAIRPSKMPTVSGSAQKQNNVLLANGSSPTTVHINSHDAQTSSMLSAVGRTGPGLVPSSLMPFDVSVVLRGPYWIRIIYRNKFSVDMRCFAGDQVWLQPATPPKGGPSVGGSLPCPQFRPFIMEHVAQGLNTLEPSFLSARHTSPNTSSGSQHVVTAANRSSGGPPGEIKLTSGVGCQIAASVSRASNAILPSGFASRTDGAPAHLSLDTNLPVHMKGELNTAFIGLGDDGGYGGGWVPHAALKKVLRGILKYLGVLWLFAQFRDILKDILGSVLKDNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLHLQVLNVKRFHHQQQQQQVPQSSAQGELTPSEIHEI |
Length | 1364 |
Position | Tail |
Organism | Hordeum vulgare subsp. vulgare (Domesticated barley) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.204 |
Instability index | 50.20 |
Isoelectric point | 6.90 |
Molecular weight | 151181.76 |
Publications | PubMed=23075845
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP14850
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 435.65| 117| 415| 202| 323| 1
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202- 323 (187.82/116.16) VLRQGRWKEAIKSELVSDSHRSagqggNNAPTQLGQDGELDSSGLKIPGLKVNYWLDERNSGSAESDSSPFIKVEA......LQD..MQIKCQHSSFVLDPL......TDKEADLSLDLSCID.....VEALILKAIACNI
535- 615 (86.09/43.55) ................................QLGED.ECSANLLDVEKLQV...LQSKLNQQSMEDRSP.RQSGI......DES..LPLKHSFSSVVNTVLgyeqdsPSKENRLPYSSPSIH.....LSP..........
618- 744 (161.73/90.64) VGHQGDSSRAGPPELDDDLLRS.....NTDTAKLASGVTLDSYLLS..NSKSAFSTDTTSSDPAGLENISTLRSEVpsrkryLSEflLNIPSLQRS.IIDGG......PRKRRKLLEDASNVQsrttlTYGTILKEGNCCI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 133.89| 40| 415| 797| 836| 2
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797- 836 (79.93/52.64) LP..FAQ..DGSWKH....TCLRLGKAGSMSWS.VRI.NDPYYGALWKLH
1209- 1258 (53.96/33.00) LPsgFASrtDGAPAHlsldTNLPVHMKGELNTAfIGLgDDGGYGGGWVPH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.95| 10| 18| 873| 882| 5
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873- 882 (16.12/ 9.95) VEADSIQRLV
893- 902 (18.83/12.95) VFACGMRRLI
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