<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14767

Description Uncharacterized protein
SequenceMGAAEAPALAPASGAGGELLLERRVMAAVKASEARGDPPLLRAVEVARLVAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNITSPSLSPLPVPNRDKITKSIDAALQLSKSYGVSGMDFGHVVILFVLILVTKLIDSVLEDCGISSGMAQEQEGVYPTEGAQPMDLDVKGVSALKQNEHREQLRRNNTVMALEVLHMMAADKKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGILGNLRSSNSMLGQLTGAGRAACWIIFDIYLENAMDGKHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILMEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANVAASKAAIFRANYKVGGGNPSMIGQSDSSTKSVGNMLHLIVEACISRNLIDTNAYLWPGYVVLTGHSKDTALPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVVAALMPLCEAFGSMPPPSNHRSTIFDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSMGSFGEVPTQPIYIDSFPKLRAWYVQNQACIASTLSGLGNTNPVHQVANKILSMICRKMTKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEILEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALQSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVGLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSNGSDITASRGVGALMGESITGQQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVINCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPVMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAVGLRSWHEHNLALSLLERGGPKAISVVVETLLH
Length1330
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy0.165
Instability index49.77
Isoelectric point8.03
Molecular weight143804.34
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14767
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     190.44|      72|     230|     771|     885|       1
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  749-  826 (114.13/82.15)	MHNSRIEFPN.SSATSTN.SGSS............................................................................................................................................................mGSfgEVPTQPIyIDSF..PKLRAWY.VQNQACIASTLSglGNTNPVHQVANKILSMICR
  828-  850 ( 3.81/43.22)	MTKSGVVSGNlSSASSSSvSGSS........................................................................................................................................................................................................................
 1008- 1061 (72.50/26.35)	.......................lstsddsyqrptlpaweileavpyvleavltacshgrissrdmttslrdlvdflpaslaaivsyfsaeitrgiwkavpmngtewpspgaalqsiedevkeilasagvqihscyprgvppmlplpmaalvgltitfkldrsldyihgiigqalencagGS..SWPSMPI.IGALwtQKVRRWHdFIVLSCIRSPFG..RDKDAVAQLIQSCFSSFLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     221.46|      63|     230|      58|     122|       2
---------------------------------------------------------------------------
   58-  122 (102.11/77.84)	LPSA....DLAGIL..VSNLCFAHNSPSLWKLLDQAMSSRLLCpLHVLALLTArVLPQRRAQPEAYRLYLE
  255-  283 (30.89/14.72)	.......................................RLIC.LNMPDKFS..VLSQRLTLIEAHKMALE
  286-  348 (88.45/57.71)	LPTShkidDLVMYIwrVSNLDYQPNNKRLVGILGNLRSSN.....SMLGQLTG...AGRAACWIIFDIYLE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     256.43|      85|     165|     371|     469|       3
---------------------------------------------------------------------------
  371-  469 (122.29/127.72)	TAQAINEASWQETfkaLWISalrLVQRArePLEGP.....IPHLDTRLCMLLALIPLAIAAILMEETDA....CGAegnkSLPRRLGLVSSLQDLVqySGLLVPP....SSL
  538-  635 (134.14/96.64)	TGHSKDTALPQES...PWVN...FMQGA..PLSDPlknalIATPASSVAELDKLYHIALNGSEQEKSAAakivCGA....SLVRGWNIQEHVVRMV..VKLLSPPlpsdSSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.92|      32|     166|    1076|    1134|       4
---------------------------------------------------------------------------
  971- 1005 (48.59/18.53)	LPLPMAAlvGLtITFKLDRSL.D..YIHGIIGQALENC
 1090- 1124 (52.32/51.60)	LHFPMAP..GF.IYLRTCRTFhDtyFVSEMILRQVINC
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14767 with Med33 domain of Kingdom Viridiplantae
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