<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14763

Description Uncharacterized protein
SequenceMGAAEAPALAPASGAGGELLLERRVMAAVKASEARGDPPLLRAVEVARLVAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPQPEAYRLYLELLKGNITSPSLSPLPVPNRDKITKSIDAALQLSKSYGVSGMDFGHVVILFVLILVTKLIDSVLEDCGISSGMAQEQEGVYPTEGAQPMDLDVKGVSALKQNEHREQLRRNNTVMALEVLHMMAADKKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGILGNLRSSNSMLGQLTGAGRAACWIIFDIYLENAMDGKHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILMEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANVAASKAAIFRANYKVGGGNPSMIGQSDSSTKSVGNMLHLIVEACISRNLIDTNAYLWPGYVVLTGHSKDTALPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVVAALMPLCEAFGSMPPPSNHRSTIFDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSMGSFGEVPTQPIYIDSFPKLRAWYVQNQACIASTLSGLGNTNPVHQVANKILSMICRKMTKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEILEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALQSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVGLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSNGSDITASRGVGALMGESITGQQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVINCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPVMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAVGLRSWHEHNLALSLLERGGPKAISVVVETLLH
Length1313
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.07
Grand average of hydropathy0.159
Instability index49.71
Isoelectric point7.53
Molecular weight141895.01
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14763
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     440.83|     136|     215|     513|     666|       1
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  513-  655 (214.04/123.12)	LWPGYVVLTgHSKDTALPQESPwVNFMQGAPLSD....PLKNALIAT.PASSVAELDK.....lyhiALNGSEQEKSAAAKIVCGASLVRGWNIQ..EHVVRMVVKLLSPPLPSDSSLQGSMSHYlSQKSTLNA..ILLGVSYV.DAVHIFSLYGMVP
  724-  872 (195.03/94.06)	LTLDYLVLM.HNSRIEFPNSSA.TSTNSGSSMGSfgevPTQPIYIDSfPKLRAWYVQNqaciastlsGLGNTNPVHQVANKIL...SMICRKMTK..SGVVSGNLSSASSSSVSGSSLSTSDDSY..QRPTLPAweILEAVPYVlEAVLTACSHGRIS
 1105- 1150 (31.76/ 6.35)	.................................................................................INCSHKLANGWSSNgpPH.....LKSGRPPLSGAASMA.......SQVAMLGA..GLLCV.................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     168.19|      66|      78|     914|     991|       2
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   36-   72 (42.61/18.69)	GDPPLLrAVEVARLVAGEPGAGLP.SAD.LAGILVSNL..C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
  916-  948 (32.63/22.17)	.........................................fahnspslwklldqamssrllcpqpeayrlylellkgnitspslsplpvpnrdkitksidaalqlsksygvsgmdfghvvilfvlilvtklidsvledcgissgmaqeqegvyptegaqpmdldvkgvsalkqnehreqlrrnntvmalevlhmmaadkkiqaflrliclnmpdkfsvlsqrltlieahkmalerllptshkiddlvmyiwrvsnldyqpnnkrlvgilgnlrssnsmlgqltgagraacwiifdiylenamdgkhlggisaieiikemsktaqaineaswqetfkalwisalrlvqrareplegpiphldtrlcmllaliplaiaailmeetdacgaegnkslprrlglvsslqdlvqysgllvppsslvnvanvaaskaaifranykvgggnpsmigqsdsstksvgnmlhliveacisrnlidtnaylwpgyvvltghskdtalpqespwvnfmqgaplsdplknaliatpassvaeldklyhialngseqeksaaakivcgaslvrgwniqehvvrmvvkllspplpsdsslqgsmshylsqkstlnaillgvsyvdavhifslygmvpdvvaalmplceafgsmpppsnhrstifdetsvysvfscaflcllrlwkfykppqeyclagrggsvrleltldylvlmhnsriefpnssatstnsgssmgsfgevptqpiyidsfpklrawyvqnqaciastlsglgntnpvhqvankilsmicrkmtksgvvsgnlssassssvsgsslstsddsyqrptlpaweileavpyvleavltacshgrissrdmttslrdlvdflpaslaaivsyfsaeitrgiwkavpmngtEWPS.P..GAA.LQSIEDEVKEILASAgvqIHSCYPR
  949- 1026 (92.96/75.09)	GVPPML.PLPMAALVGLTITFKLDrSLDyIHGIIGQALenC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aggsSWPSmPiiGALwTQKVRRWHDFIVLSC...IRSPFGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     479.15|     154|     168|      76|     242|       3
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   76-  175 (133.94/83.57)	...................................................................................NSPSLWK.......LLDQAMSSRLLCPQPEAYRL......YLE.LLKGNITSPSL.......SPLPV.PNRDKITKSIDAALQLSKSY.G.VSGMDFGHVVILFVLILVTKLIDSVLedCGISS
  176-  344 (199.19/149.99)	GMAQEQEGVypTEGAQPMDLDVKGVSALKqnehreQLRRNNTVMALEVLHMmaaDKKIQAFLRLICL................NMPDKFS.......VLSQRLT..LI....EAHKM......ALErLLPTSHKIDDLvmyiwrvSNLDYqPNNKRLV.GILGNLRSSNSMlGqLTGAGRAACWIIFDIYLENAMDGKHL..GGISA
  350-  496 (146.01/88.40)	EMSKTAQAI..NEASWQETFKALWISALR......LVQRAREPLEGPIPHL...DTRLCMLLALIPLaiaailmeetdacgaeGNKSLPRrlglvssLQDLVQYSGLLVPPSSLVNVanvaasKAA.IFRANYKVGGG.......NPSMI.GQSDSSTKSVGNMLHL........................................
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.33|      19|     370|     656|     676|       5
---------------------------------------------------------------------------
  656-  676 (34.17/25.54)	DVVAALMPLCeaFGSM..PPPSN
 1029- 1049 (31.16/16.92)	DAVAQLIQSC..FSSFlrSSPSN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14763 with Med33 domain of Kingdom Viridiplantae
Unable to open file!