<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14759

Description Uncharacterized protein
SequenceAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLVRWFCRVLPQRRAQPEAYRLYLELLKGNITSPSLSPLPVPNRDKITKSIDAALQLSKSYGVSGMDFGHVVILFVLILVTKLIDSVLEDCGISSGMAQEQEGVYPTEGAQPMDLDVKGVSALKQNEHREQLRRNNTVMALEVLHMMAADKKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGILGNLRSSNSMLGQLTGAGRAACWIIFDIYLENAMDGKHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILMEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANVAASKAAIFRANYKVGGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTNAYLWPGYVVLTGHSKDTALPQESPWVNFMQGAPLSDPLKNALIATPASRYM
Length528
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy0.097
Instability index49.54
Isoelectric point8.30
Molecular weight57758.69
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14759
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.64|      20|      39|      32|      51|       1
---------------------------------------------------------------------------
   32-   51 (35.00/22.67)	KLLDQAMSSRLLCPLHVLVR
   72-   91 (35.64/23.22)	ELLKGNITSPSLSPLPVPNR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.55|      18|      39|     250|     267|       2
---------------------------------------------------------------------------
  250-  267 (33.54/20.75)	WRVSN..LDYQPNNKRLVGI
  290-  309 (29.01/17.09)	WIIFDiyLENAMDGKHLGGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.97|      50|     160|     192|     248|       3
---------------------------------------------------------------------------
  192-  248 (71.21/66.88)	HMmaaDKKIQAFLRLICLNMPdkfSVLSQRLTLI..EAHKmALERLLPTSHKIDDLVMY
  358-  409 (79.76/52.22)	HL...DTRLCMLLALIPLAIA...AILMEETDACgaEGNK.SLPRRLGLVSSLQDLVQY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14759 with Med33 domain of Kingdom Viridiplantae
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