<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14758

Description Uncharacterized protein
SequenceQRLLTRRERGRGGEGRRNRDAKSQTQTLGDVARERMGAAEAPALAPASGAGGELLLERRVMAAVKASEARGDPPLLRAVEVARLVAGEPGAGLPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNITSPSLSPLPVPNRDKITKSIDAALQLSKSYGVSGMDFGHVVILFVLILVTKLIDSVLEDCGISSGMAQEQEGVYPTEGAQPMDLDVKGVSALKQNEHREQLRRNNTVMALEVLHMMAADKKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGILGNLRSSNSMLGQLTGAGRAACWIIFDIYLENAMDGKHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILMEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANVAASKAAIFRANYKVGGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTNAYLWPGYVVLTGHSKDTALPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVVAALMPLCEAFGSMPPPSNHRSTIFDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSMGSFGEVPTQPIYIDSFPKLRAWYVQNQACIASTLSGLGNTNPVHQVANKILSMICRKMTKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEILEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALQSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVGLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSNGSDITASRGVGALMGESITGQQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVINCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPVMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAVGLRSWHEHNLALSLLERGGPKAISVVVETLLH
Length1365
PositionTail
OrganismHordeum vulgare subsp. vulgare (Domesticated barley)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Hordeinae> Hordeum.
Aromaticity0.06
Grand average of hydropathy0.114
Instability index49.68
Isoelectric point8.52
Molecular weight147850.78
Publications
PubMed=23075845

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14758
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     294.77|     103|     414|     622|     745|       1
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  633-  698 (91.12/69.30)	...........................................................................................................................................................AAK.............................................IVCGASLVRGWNIQ..EHVVRMVVKLLSPPLPSDSSLQGSMSHYlSQKSTLNA..ILLGVSYV.DAVH
  699-  739 (30.21/27.74)	IFSLYGMVPDVVAALMPLCeaFGSM..PPPSNhRSTIFDETSV....................................................................................................................................................................................................................................
  852-  915 (70.58/34.82)	...........................................ysvfscaflcllrlwkfykppqeyclagrggsvrleltldylvlmhnsriefpnssatstnsgssmgsfgevptqpiyidsfpklrawyvqnqaciastlsglgntnpvhqvANK.............................................IL...SMICRKMTK..SGVVSGNLSSASSSSVSGSSLSTSDDSY..QRPTLPAweILEAVPYVlEAVL
 1072- 1202 (102.86/62.91)	IRSPFGRDKDAVAQLIQSC..FSSFlrSSPSN.GSDITASRGV...................................................................................................................galmgesitgqqglhfpmapgfiylrtcrtfhdtyfvsemilrqvINCSHKLANGWSSNgpPH.....LKSGRPPLSGAASMA.......SQVAMLGA..GLLCV........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     254.39|      69|     414|      47|     115|       2
---------------------------------------------------------------------------
   47-  115 (115.06/62.86)	ASGAGGELLLERRVMAAVKASEARGDPPLLRA....VEVARLVAGEPGAGLP.SAD.LAGILVSNL..CFAHNS.PSL
  469-  531 (90.84/48.07)	ACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPpsslVNVANVAASK............AAIFRANY..KVGGGN.PSM
 1000- 1049 (48.49/22.20)	.......................RGVPPML.P....LPMAALVGLTITFKLDrSLDyIHGIIGQALenCAGGSSwPSM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.34|      14|     414|     834|     848|       3
---------------------------------------------------------------------------
  834-  848 (22.04/17.68)	CiASTLSGLGNTNPV
 1251- 1264 (27.30/16.73)	C.GSLLWGSEKTSPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     263.87|      89|     166|     126|     291|       4
---------------------------------------------------------------------------
  129-  226 (124.14/187.28)	CpLHVLALLTarVLPQRRAQPEAYRLYLELLKGniTSPSLSPLpV............PNRDKITkSIDAALQLSKSY.G.VSGMDFGHVVILFVLILVTKLIDSVLedCGIS
  293-  395 (139.73/61.80)	C.LNMPDKFS..VLSQRLTLIEAHKMALERLLP..TSHKIDDL.VmyiwrvsnldyqPNNKRLV.GILGNLRSSNSMlGqLTGAGRAACWIIFDIYLENAMDGKHL..GGIS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14758 with Med33 domain of Kingdom Viridiplantae
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