<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14647

Description Developmental regulator medusa
SequenceMIRTIVLGLATISFIMASAQESHEITFTNNCGYGTPVLSDQSGKILSRGDTYKASSSVAGLRAYLQDGKCTEPDGVGCGLAEMTLKNPDGQGGQESINLSLIPPNTFTEAIAVVYTGACAGSGAYCSEAGCKTAYQVSNDDCVIVTCEEANAGVNYPGQKAFPGKYLERMQTTQTPDTSSTSTTLNTKLDESPSQTIATSTLTNQTNGEPSSFEVVDGESGKEIETQLDKDKNIDPLPLSKSASLQRQLEILNSLKSRIIRLRTLPSQLLLPKPSLNAFGGDLDLGLSSSGPNDPQDTVALTSFLTSDLTYDGQVRLWAEEAFRTVSSVQNTLLRDDTQESLRTAKESDSQEQLVIPHTREQHPVVAVSPAAFPPYHLQPTHVFPSPQSNTNVYDINELTSFIREQNKKSRDSELRENNSGIKLGIWAHSRPKPGSSHFVSDPVTVRALLPDVAVVFMKLRHYHMGNHITPLSVESVVALGPRERKGPHSHSDFFVFQKLTQQLARMIEQEPNVSLVQFIELLKSYEKLFDVQCSKCESVLSPEDHIPPIARSAFSRLDYSIVLRIPSSGRLSDSSELGVLGVLQLWSLRFRPTSTLPYNLMHSVYAESGLRTSHQPSVDIAMSRHQQVPSSTIAENNSPTFNGTNQPRISAPYQHLEIETTPLRPKSTTPPVTHRPNLISTTGMITVVSYTPYEGEAGIPVSVLVDLHTNIAGNKDILSTSFSSLKMRLVFGDNPVKTTLKRLPVPQGSNIEEKNNVMHLKLLANAPFHSEAHLTDRVCVPLTVQAMNAKGEVVENFIFGSFTYWIPTTVRPASTQDISEKRMAVGDNRKRDDDEEDFHQTGFNPALLNSPKRRRVDDEEPKYRFVRKNFGPPGVAEKQAKIEFVDNSHYCHPNSLSEGWTSHELATGRKLVWFHKEQKEDRLVVSCKVISQEDYQTDATVISLLYRPETGNCWYTSIDVIFLLERLLTVKEPFTVEEKNRIRRNLEALGPTTISKTKRNHESFFTRVMDFPPPRPRNIEKDFKVFPWSSLSTALEKIIDKYAAIPVLSSDSSTSPTSRSSSVPRTRSRSGGVSRSRSRSSVLPPVNYSNAQKQVHPQLYLADNSPLIPTSDTKALLPDPEQATFQLYSQAGYPLPDHWPRRGSIVSLGATSAQTDDYYPGHLTQGTESVSMPVQANDALSNPFASDVDFGSLSLRNQGHDHVYPSGVMYSSVHSFPGETHAPDTTYHENLFDQSRRSSLASDFELLYPGSHTDPPTQNLGGTGPYNSSSHRDLNHDNTSYPTFSTNQVAF
Length1292
PositionTail
OrganismPyrrhoderma noxium
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Hymenochaetales> Hymenochaetaceae> Pyrrhoderma.
Aromaticity0.07
Grand average of hydropathy-0.477
Instability index50.54
Isoelectric point6.10
Molecular weight142820.14
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14647
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     616.02|     181|     187|     207|     393|       1
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   85-  203 (137.24/65.55)	..................................................................LKNP..DGQGGQE.SINLSLI...PPNTFTEAIAVV..YTGACAGSGAYC..SEAGCKTAYQVS.N....DDcvivTCEEANAGVNYPGQK..AFPGKYLER.MQTTQTPDTSSTSTTLNTKLDESPSqtiaTSTLT
  207-  393 (275.90/159.64)	NgEPSSFevVDGESGKEIETQLdKDKNiDPLPLSKSASlQRQLEILNSLKSRIIRLRT.LPS.QLLLPKPSLNAFGGDL.DLGLSSS...GPNDPQDTVALTSFLTSDLTYDGQVRLWAEEAFRTVSSVQ.NTLLRDD....TQESLRTAKESDSQEQLVIPHTREQH.PVVAVSPAAFPPYHLQPTHVFPSPQ....SNTNV
  397-  553 (202.88/102.35)	N.ELTSF..IREQNKKSRDSEL.RENN.SGIKLGIWAH.SRPKPGSSHFVSDPVTVRAlLPDvAVVFMKLRHYHMGNHItPLSVESVvalGPRERKGPHSHSDFFVFQKLTQQLARMIEQEP..NVSLVQfIELLK......SYEKLFDVQCSKC.ESVLSP...EDHiPPIARS............................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     467.70|     149|     441|     591|     753|       2
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  591-  753 (228.90/146.89)	FRPTStlPYNLMH..SVYAESGLR........................TSHQPSVDIAMSRHQQVPSSTIAENNSPTFNGTNQPRISAPYQHLeIETTPLRPKSTTPPVTHRPNLiSTTGMITVVSYtPYEGEAGIPVSVlVDLHTNIAGNKDI....LSTSFSSLKMrlvfgdnPVKTTlKRLPVPQGSNIE
 1012- 1190 (238.80/120.90)	FPPPR..PRNIEKdfKVFPWSSLStalekiidkyaaipvlssdsstspTSRSSSVPRTRSRSGGVSRSRSRSSVLPPVNYSNAQKQVHPQLYL.ADNSPLIPTSDTKALLPDPEQ.ATFQLYSQAGY.PLPDHWPRRGSI.VSLGATSAQTDDYypghLTQGTESVSM.......PVQAN.DALSNPFASDVD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14647 with Med27 domain of Kingdom Fungi
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