<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14633
Description |
Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MSLNVATTNEEISNVAYLVASSSSPATIDAFRRRIAVRHTGSSLLDSLLSSVHVAATSYIYLFRIIRGIQLDSFNDLDFNGLNVVESSSFSPQDIVFPTFPVKALRTVISHFLNAVRIRLLDDISHDASVLGRLNSGFLIAHSTASNEWSAPWAIMRPLVYCHLQVHLTSSRLLIHPLVIPTSFLPVTPSLTQGSPILLLPYATPAYFLASYKGPCSALSKQFKECFEGLGVSSWDPESYIIAWVSVENRQGEDKGVMIIYPTSLCVRSLFPNTSSLPHIPTLPATLQSSPQSTPSLPFLSVSSPTSVSAFRTLTISKSRDINRVAKEVGGYVDAVAKERERERERLKREREGVGTTVAQPSSAQVPHLYVQQQVQLQQQQQTQQQQMQQQQAQQQQQMLDFYPSPPQTNLMVPPPSGHVSPVAPVAAPMDVDPLPNPAPSQPSYEPFNSNWMDMEDWMNGLGDTVNVGNGGDRGMGIGMMDFEADFTEDDFSFFDDKPPPPMPAVTGLTPAAPLEDPHWEIEPTPDVGTGLPSPPAESVLNFRVDDIKVQMKVDTAGGLWDAIPFADSYRATDGKYNMGKFSSSPGRAEGWRKRYEKVTDPRLGVVKRLALKRAKSIDEPERDDWEAEWREGNPEPEEDSEGADDSDEDMESAGEEESVDDTEGERPCTPLPAWIPMGPALLPMHFRHEVMLPLSAPLRSGVVGGSSGVGAGVSSVPTPVSPGRVGKGKSLQVAAESLGKEIVENSVWAAVWDGVNSKGNPGGFGRTLWEKDVQVVGRLFSAVQDINAPVQLEKLFGLAGSSGTGNGSESRLEKLESPMLLVGKGDAVIQISPPALRFWDKLGLGPRSGKKDIQAFVVFDSLQEQMSDKISEWLVNLRTVYEGKHFGTVSFGQSQFCEQDMNGVVPIRYDSTLRKTLDAFIAGSSSPPRTSTIVFIVTSITTMTLLSPILRQLFSVVRKASASHPQMLFHFVPEQILYSESNSQVEDLCGSVYDRILVPVVRSMSRKLSSAGEVTKFLEDPAFVLARTSEESKVVYSGPKADATAMILGVMDKGTFLHVGYGVSECGKWIFASCNDQRGDGHDLGVWLTSKGGGEANEGEVDEMTFLVHKVWDFTARFAKKANIEWRIVIAKLGSMGEAELDAWTRHLENDTEMGPVHVSVVAVEPSTPWMFTSRPEFDAPKSVSPSLKSIGRSASVSSSKPSKHNSHPVFVDMAFSTYALFQQSPLPVSVPPTLSDMGLDLGHIPDPSPWHGGEETHPQSPSIEHDHSNLPHVLPLIPHASSTLIRVPSSTTVATTTMLHIHLLHMIRSVGCSYPASDYNRLLRDITHSYYALSVLSSLKWRMKGVNPILPSHLGAVEAMRTAVVSGGSTDTPDS |
Length | 1377 |
Position | Kinase |
Organism | Armillaria ostoyae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes>
Agaricomycetidae> Agaricales> Physalacriaceae> Armillaria.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.226 |
Instability index | 51.47 |
Isoelectric point | 5.39 |
Molecular weight | 150314.28 |
Publications | PubMed=29085064
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Function
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
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GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
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Interaction
Repeat regions
Repeats |
>MDP14633
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 103.04| 24| 87| 414| 437| 1
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414- 437 (47.02/25.85) PPP.....SGHVS.PVAPVAAP.MDVDPLPN
499- 527 (34.67/16.97) PPPpmpavTG.LT.PAAPLEDPhWEIEPTPD
535- 555 (21.35/ 7.39) PPA.....ESVLNfRVDDIKVQ.MKVD....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 127.49| 40| 43| 764| 804| 2
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764- 804 (65.33/43.26) GFGRTL..WEKDVQVVGRlFSAVQDINAP.VQLEKLFGLAGSSG
808- 850 (62.16/36.76) GSESRLekLESPMLLVGK.GDAVIQISPPaLRFWDKLGLGPRSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 303.64| 102| 336| 868| 1043| 3
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912- 1043 (129.66/210.18) STLRKTLdAFIagsssPPRTSTIVFIVTSIT..TMTLLSPilrQLFSVVRKASASHPQmlfhfvpeqilySESNSQVEDLCGSVYdriLVPVVRSMSRKLSSAGEVTkfledPAFVLARTSEESKVVySGPKAD
1270- 1373 (173.97/98.56) SNLPHVL.PLI.....PHASSTLIRVPSSTTvaTTTMLHI...HLLHMIRSVGCSYPA............SDYNRLLRDITHSYY...ALSVLSSLKWRMKGVNPIL.....PSHLGAVEAMRTAVV.SGGSTD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 193.55| 58| 121| 580| 638| 4
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580- 638 (99.50/49.18) GKFSSSPGRAEGWRKRYEKVTDPRLGVVKRLALKrAKSIDEP..ERDDWEAEWREGNPEPE
702- 761 (94.05/43.04) GVVGGSSGVGAGVSSVPTPVSPGRVGKGKSLQVA.AESLGKEivENSVWAAVWDGVNSKGN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.71| 38| 411| 448| 492| 5
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448- 492 (64.66/63.82) FNSNWMDMED....WMNGLgDTVNvgnggdRGMGIGMMDF.EADFTEDDF
860- 902 (62.05/41.55) FDSLQEQMSDkiseWLVNL.RTVY......EGKHFGTVSFgQSQFCEQDM
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 134.74| 40| 47| 1168| 1210| 10
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1168- 1210 (68.09/40.22) STPWMFTSRPefdAPKSVSPSLKSIGRS.ASVSSSKP..SKHNSHP
1218- 1260 (66.65/32.60) STYALFQQSP...LPVSVPPTLSDMGLDlGHIPDPSPwhGGEETHP
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