<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14577

Description "Putative coactivator CBP, KIX domain-containing protein"
SequenceMDTNNWRPTQGANGAIGDPTMETGDWRAQLQADSRQRIVNKIMDTLKRHLPFSGHEGLQELKKIAVRFEEKIYTAATSQSDYLRKISLKMLTMETRSQNPMSDPMQSNSTANSVNPSDPGSQVMQQVNNQGQQLPIPVASNNMQQGQQMMSQSMHNNIGSTGMQGSSGLSSALPPGSGLQQTPMTNVAGQNSNLQNMQNMSSVQQNTVGNTMGNNNFANQRQIPGRQLVPQQQQQQQQQQQQTQTQNSQYLYQQQLHQMAKQKLQQPSMQPHMQQQQQQQNNMLQQGHLQQSQQSVMQPTMMQTSSLSTVVQNQQPVVPQSSQPLMNQQSVLRPQRQQQVQPIQQQLQSTQQNSMGQQTNATNMQQNQLIGQQNNYSDMQQQRLIGQQNKLSSLQQPQQQLIGQHNNLSSMQQQQSGQQQQLIGNQSGNTSMQTNQHSVQQMLQSNKMPIQQQNQQSSANLLPTQVQQSQPQLQQPVMPHMQSQPQLQQQQQQVGMQQQSNLLQNNMQQRLPTTGGFQQQNVIDQQKQLFQQQRAMPEASSTSLDSTAGNTNGVDWQEEVYQKIKAMKDMYLLDLNDMHQKILSKLQQHDSLPQQPKNEQLEKLKVFKNMLERFMQFLQIPKHGILPNYKEKLGTYEKQIINVINSNRRKPAAPQQQAQSQALPPQHMQSLQQSQQTHSQLTQVPSHDNNQMNLHGSMATMQQNNMGNLQQNPAVSLSGGSNAQQNMMNSIQPSSNLDPGQNTGMNSLQHVSNGSLQQNTVSGTQQVNMNPMSLQANSNMLQNQHIKQQEQLLQSQQLKQFQQRQLQQQFLHKQQLLQQQQQQHQFHQQTKQQLPGNQLSQLPQISDSGDIKLRQQQMNVKPGGLQQHHAAAVAAQRSAYHQQLKPGAPFSPQLLSAASPQMSQHASPQIDQSNMFKSANSPFAVPSPSTSSASPLPGEFERINGVSSLSNVGNLGHQQQPPNQIGTPGISASPLLAEFTSPDGNHGVLPSMGPGKSTVTEQPLERLLKAVKSISPTALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFVTQDGTNGIRKMKRFTSAMPLNVVSSAGSVNDSFKQLNVSETSELDSTASSAIKRPRTETNHALLEEIKEINRGLIDTVVAVSEEDVDPAAATAASEGGDGTVVKCSFSAVALGPNLKSQYASAQMSPIQPLRLLVPANYPNCSPMLLDKFPAEVSKEFEDLSTKTKSRFSISLRSLTQPMSLKDIARTWDVCARGVISEYAQQSGGGTFSSKYGTWENCLSAA
Length1290
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.03
Grand average of hydropathy-0.829
Instability index65.72
Isoelectric point9.37
Molecular weight142688.88
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14577
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     250.55|      40|      40|     216|     255|       3
---------------------------------------------------------------------------
  216-  255 (74.33/19.12)	NFANQR.QIPGRQLVPQQQQQQQ.......QQQQ..QTQTQNSQYLYQQQ
  258-  287 (45.29/ 8.05)	QMAKQKlQQPSMQ..PHMQQQQQ.......QQ.........N.NML.QQG
  288-  329 (44.43/ 7.73)	HL.QQS.Q....QSVMQPTMMQTsslstvvQNQQ..PVVPQSSQPLMNQQ
  436-  476 (45.93/ 8.30)	QHSVQQ.MLQSNKM.PIQQQNQQ.......SSANllPTQVQQSQPQLQQP
  689-  726 (40.57/ 6.26)	..NNQM.NLHGSMATMQQNNMGN.......LQQN..PAVSLSGGSNAQQN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     224.56|      40|      41|     932|     971|       4
---------------------------------------------------------------------------
  834-  859 (24.81/ 6.76)	....LPG..NQL.SQLPQIS......DSGDIKLRQQQM.N.............
  862-  896 (33.08/11.97)	.....PGGLQQ..HHAAAVA......AQRSAYHQQLKPgA...PF.SP.QLLS
  897-  929 (38.17/15.18)	AASPQMSQH......ASPQI......DQSNMFKSANSP.F...AV.PS.PS..
  932-  971 (69.28/34.80)	SASPLPGEFERI.NGVSSLS......NVGNLGHQQQPP.N...QI.GT.PGIS
 1000- 1044 (26.85/ 8.04)	TEQPL....ERLlKAVKSISptalsaSVSDIGSVVSMI.D...RIaGSaPGNG
 1045- 1076 (32.36/11.52)	SRAAV.GE.........DLV......AMTKC..RLQAR.NfvtQD.GT.NGIR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.47|      13|      19|       1|      18|       5
---------------------------------------------------------------------------
    1-   13 (26.55/25.70)	MDTNNWRPTQGAN
   21-   33 (24.92/ 9.19)	METGDWRAQLQAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.57|      26|      31|     511|     538|       6
---------------------------------------------------------------------------
  500-  533 (31.02/ 8.48)	SNllQnnmqqrLPTTGGFQQQNVIDQQKQLFQQQ
  771-  796 (37.55/ 8.92)	PM..S......LQANSNMLQNQHIKQQEQLLQSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.35|      26|     329|     334|     359|       7
---------------------------------------------------------------------------
  334-  359 (49.92/13.50)	PQRQQQVQPIQ.QQLQSTQQNSMGQQT
  410-  434 (36.34/ 7.51)	SMQQQQSGQ.Q.QQLIGNQSGNTSMQT
  654-  677 (33.09/ 6.07)	PQQQAQSQALPpQHMQSLQQ...SQQT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.52|      12|      29|     366|     377|       8
---------------------------------------------------------------------------
  366-  377 (22.60/ 7.28)	QNQLIGQQNNYS
  398-  409 (22.92/ 7.52)	QQQLIGQHNNLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.96|      17|      17|     116|     132|      10
---------------------------------------------------------------------------
  116-  132 (32.19/11.81)	PSDPGSQVMQQVNN.QGQ
  135-  152 (24.77/ 7.15)	PIPVASNNMQQGQQmMSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.82|      13|     329|     487|     499|      11
---------------------------------------------------------------------------
  487-  499 (25.72/ 7.48)	LQQQQQQVGMQQQ
  817-  829 (27.10/ 8.31)	LQQQQQQHQFHQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.90|      15|      17|    1119|    1133|      15
---------------------------------------------------------------------------
 1119- 1133 (25.82/18.68)	IKRPRTETNHALLEE
 1137- 1151 (24.09/16.96)	INRGLIDTVVAVSEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.86|      19|     544|     194|     215|      18
---------------------------------------------------------------------------
  197-  215 (36.72/16.74)	MQNMSSVQ.QNTVGNTMGNN
  536-  555 (28.14/10.07)	MPEASSTSlDSTAGNTNGVD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14577 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IINVINSNRRKPAAPQQQAQSQALPPQHMQSLQQSQQTHSQLTQVPSHDNNQMNLHGSMATMQQNNMGNLQQNPAVSLSGGSNAQQNMMNSIQPSSNLDPGQNTGMNSLQHVSNGSLQQNTVSGTQQVNMNPMSLQANSNMLQNQHIKQQEQLLQS
2) KISLKMLTMETRSQNPMSDPMQSNSTANSVNPSDPGSQVMQQVNNQGQQLPIPVASNNMQQGQQMMSQSMHNNIGSTGMQGSSGLSSALPPGSGLQQTPMTNVAGQNSNLQNMQNMSSVQQNTVGNTMGNNNFANQRQIPGRQLVPQQQQQQQQQQQQTQTQNSQYLYQQQLHQMAKQKLQQPSMQPHMQQQQQQQNNMLQQGHLQQSQQSVMQPTMMQTSSLSTVVQNQQPVVPQSSQPLMNQQSVLRPQRQQQVQPIQQQLQSTQQNSMGQQTNATNMQQNQLIGQQNNYSDMQQQRLIGQQNKLSSLQQPQQQLIGQHNNLSSMQQQQSGQQQQLIGNQSGNTSMQTNQHSVQQMLQSNKMPIQQQNQQSSANLLPTQVQQSQPQLQQPVMPHMQSQPQLQQQQQQVGMQQQSNLLQNNMQQRLPTTGGFQQQNVID
3) MDTNNWRPTQGANGAIGDPTMETGDWRAQLQADS
4) QFLHKQQLLQQQQQQHQFHQQTKQQLPGNQLSQLPQISDSGDIKLRQQQMNVKPGGLQQHHAAAVAAQRSAYHQQLKPGAPFSPQLLSAASPQMSQHASPQIDQSNMFKSANSPFAVPSPSTSSASPLPGEFERINGVSSLSNVGNLGHQQQPPNQIGTPGISASPLLAEFTSPDGNHGVLPSMGPGKSTVTEQPLERL
640
85
1
809
795
524
34
1007










Molecular Recognition Features






MoRF SequenceStartStop




NANANA