<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14576

Description Putative heat shock protein 70 family
SequenceMARSGIVLAIVLIGCLFAISIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQRDMKLFPYKIVNKDGKPYIQVSLKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDHRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVYEGERSLTKDCRLLGTFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLEADEKEKIEAATKEALEWLDDNQSAEKEEYDEKLKEVEAIITRTLFVGRTAVKHGSLRHRASNRCLFAITIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQRDMKLFPYKIVNKDGKPYIQVSLKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDHRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTVVSIKVYEGERSLTKDCRLLGTFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIEAATKEALEWLDDNQSAEKEEYDEKLKEVEAVCNPIVTAVYQRSGGAPGGGAESTEDDDEHDEL
Length1267
PositionUnknown
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.06
Grand average of hydropathy-0.450
Instability index29.85
Isoelectric point5.21
Molecular weight140011.15
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
cytosol	GO:0005829	IBA:GO_Central
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW
nucleus	GO:0005634	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14576
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     197.80|      27|      27|     403|     429|       1
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  403-  429 (54.45/36.62)	GGI.................................LSGEGGDETKDILLLDVAPLTLGI
  433-  457 (53.05/35.46)	GGV.................................YEGERS.LTKDCRLLGTFDLT.GI
 1009- 1035 (54.45/36.62)	GGI.................................LSGEGGDETKDILLLDVAPLTLGI
 1039- 1096 (35.85/21.26)	GGVmtkliprntviptkksqvfttyqdqqtvvsikvYEGERS.LTKDCRLLGTFDLT.GI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     126.12|      17|      17|     178|     194|       2
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  176-  192 (33.22/17.04)	YFNDAQRQATKDAGVIA
  193-  209 (29.84/14.62)	GLNVARIINEPTAAAIA
  782-  798 (33.22/17.04)	YFNDAQRQATKDAGVIA
  799-  815 (29.84/14.62)	GLNVARIINEPTAAAIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|    1197.50|     354|     603|      15|     402|       3
---------------------------------------------------------------------------
   15-  175 (256.59/185.93)	...........................................................................................................................................................................................................................................................................................................................................................................................................................CLFAISIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQRDMKLFPYKIVNKDGKPYIQVSLKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPA
  210-  402 (342.11/251.11)	YGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDHRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQ...........................................................................................................................................................................................................................................................................................................................................................................................
  621-  781 (256.70/186.02)	.................................................................................................................................................................................................ggilsgeggdetkdillldvapltlgietvggvyegersltkdcrllgtfdltgippaprgtpqievtfevdangilnvkaedkasgksekititnekgrlsqeeiermvreaeefaeedkkvkekidarnaletyvynmknqindkdkladkleadekekieaatkealewlddnqsaekeeydeklkeveaiitrtlfvgrtavkhgslrhrasnrCLFAITIAKEEASKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNAERTIFDVKRLIGRKFEDKEVQRDMKLFPYKIVNKDGKPYIQVSLKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPA
  816- 1008 (342.11/251.11)	YGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDHRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLRDYFDGKEPNKGVNPDEAVAYGAAVQ...........................................................................................................................................................................................................................................................................................................................................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     241.41|      26|      26|     541|     566|       4
---------------------------------------------------------------------------
  514-  537 (36.52/19.44)	EAEEFAEEDKKVKEKIDA..RNA.LET
  541-  566 (44.72/25.51)	NMKNQINDKDKLADKLEADEKEK.IEA
  570-  595 (39.86/21.90)	EALEWLDD.NQSAEKEEYDEKLKeVEA
 1153- 1176 (36.52/19.44)	EAEEFAEEDKKVKEKIDA..RNA.LET
 1180- 1205 (43.94/24.92)	NMKNQINDKDKLADKLESDEKEK.IEA
 1209- 1234 (39.86/21.90)	EALEWLDD.NQSAEKEEYDEKLKeVEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      99.25|      13|      28|     460|     472|       5
---------------------------------------------------------------------------
  460-  472 (26.14/15.13)	APRGTPQIEVTFE
  487-  499 (23.49/12.84)	ASGKSEKITITNE
 1099- 1111 (26.14/15.13)	APRGTPQIEVTFE
 1126- 1138 (23.49/12.84)	ASGKSEKITITNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.00|      28|     637|     473|     513|       6
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  473-  513 (47.50/33.68)	VDANGILNVKAEDKasgksekititneKGRLSQEEIERMVR
 1112- 1152 (47.50/33.68)	VDANGILNVKAEDKasgksekititneKGRLSQEEIERMVR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14576 with Med37 domain of Kingdom Viridiplantae
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