<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14555

Description "Putative coactivator CBP, KIX domain-containing protein"
SequenceMDTSNWKGAVDWRTLLPPDSRRKLVDKIMDNLKKQPQFSGPEKLHELKDFALRFEEKYYTAATSQADYMRRISLKLMGIENRSANHMPNSLPSNATCDSGSQGMQQLNNQARSTATQNSSLQNISVTQRQIPASQSSQHYLYQQQIAKQKLLQQNNTTSVQPHVQQQHQNYALMQPTMLQPSSLSTIKQNQQPHLSQQLALRQLRQPQQQQQQQQPRVFGQQNNNLSNAQSIGQHNNFSAIQQHLGHQKQPQSLGAQSTMHSSHLLQSTQGQRSQMELQPQVIPQSAQFQHQLNMNQRLPASFHQQRAMPEASSTSSDSTAQTGNPNSGDCQEEVYQKVKAMKDQYFQGLADLYPKILGRLQQQPNGDQAEKLKKFKHMLERCMKFLQLPKNNISPSHKEKLGALEREIVYLTSSQMRKPGPTLQQRMNSLHQSQMQPHENQMQSVNLQHNSLATLHHNSASTAQQNMMSMLQQQQPSSNMLPHQQLKQLHSRQMQQQLMHKQQLHFHPQTKHSMKLNVNQINDSNELKIKQQTEMKSESLKQLKLDQKNVFNSVTTSSTPLQPANSPFFVSSPSTPSTSNLPGDTDKINSSVSLLANDGNICTPGISASPLLAECTNPDANGAFVHSGKLTTIEQPLERLLKVVKSISPESLSASVRDIDSVVSMIDSIAGTAPGNGSRTAVGEDLVAMTKATTTGKRKMKRFMNNPMFINVVSSASSFNHLENSELESTATSTIKRPRVEMKHPLLEEIREINEGLIDTVVDISQENADPEVGKGTIVKCSYSAVALCPNLKSQYASMQMSPIQPLRLLVPANYPNCSPILLDEFPVEVSKEYEEDLSIKAKWRFNSCVRKLSDPMSLEMMARTWDVCARAVILECVQQTGGGTFTSKYGAWEDCLTAA
Length901
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.05
Grand average of hydropathy-0.713
Instability index59.22
Isoelectric point9.13
Molecular weight100982.02
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14555
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.48|      15|      15|     472|     486|       1
---------------------------------------------------------------------------
  472-  486 (29.15/ 9.62)	LQQQQPSSNMLPHQQ
  490-  504 (25.33/ 7.39)	LHSRQMQQQLMHKQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      67.73|      15|      15|     175|     189|       2
---------------------------------------------------------------------------
  175-  189 (25.11/ 8.86)	QPTMLQPSSLSTIKQ
  279-  291 (21.13/ 6.29)	QPQVI.PQS.AQFQH
  292-  306 (21.48/ 6.52)	QLNMNQRLPASFHQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     348.47|     111|     253|     310|     421|       3
---------------------------------------------------------------------------
   24-   73 (45.30/17.50)	..................................................................LVDKIMDNLKKQPQFSGPE.....................................KLHELKDF........................ALRFEEKYYTaaTSQadyMRRIS
   88-  156 (38.03/13.67)	P..NS...LPSNATCDSGsqgmqqlnNqARSTATQNSSLQNISVTQRQipasqssqhylYQQQIAK......QKLLQQNN.................................................................................................
  310-  421 (189.09/101.27)	PeASS...TSSDSTAQTG........N.PNSGDCQEEVYQKVKAMKDQ...........YFQGLADLYPKILGRLQQQPNGDQAE.....................................KLKKFKHMLERCMKFLQLPKNNISPSHKEKLGALEREIVYLT..SSQ...MRKPG
  424-  462 (29.18/ 8.51)	..........................................................................LQQRMNSLHQS.....................................QM....QPHENQMQSVNLQHNSLATLHHNSAS.......................
  564-  655 (46.87/18.60)	P.ANSpffVSSPSTPSTS........NlPGDTDKINSS...............................................vsllandgnictpgisaspllaectnpdangafvhsgKLTTIEQPLERLLKVV...K.SISP...ESLSA......................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.83|      13|      32|     191|     222|       5
---------------------------------------------------------------------------
  191-  209 (19.98/ 9.83)	Q.......QPHLSQQlalrqlRQPQQ
  234-  253 (18.85/10.30)	QhnnfsaiQQHLGHQ......KQPQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.14|      12|     207|     530|     545|       6
---------------------------------------------------------------------------
  527-  538 (19.39/19.34)	ELKIKQQTEMKS
  543-  554 (19.75/ 6.62)	QLKLDQKNVFNS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.40|      27|     261|     594|     625|       8
---------------------------------------------------------------------------
  594-  625 (43.01/42.54)	SL..LANDGNICtpgisASPLLAECTNPDANGAF
  859-  887 (45.39/31.10)	SLemMARTWDVC.....ARAVILECVQQTGGGTF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14555 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LLQQNNTTSVQPHVQQQHQNYALMQPTMLQPSSLSTIKQNQQPHLSQQLALRQLRQPQQQQQQQQPRVFGQQNNNLSNAQSIGQHNNFSAIQQHLGHQKQPQSLGAQSTMHSSHLLQSTQGQRSQMELQPQVIPQSAQFQHQLNMNQRLPASFHQQRAMPEASSTSSDSTAQTGNPNSGDCQEEV
2) LQLPKNNISPSHKEKLGALEREIVYLTSSQMRKPGPTLQQRMNSLHQSQMQPHENQMQSVNLQHNSLATLHHNSASTAQQNMMSMLQQQQPSSNMLPHQQLKQLHSRQMQQQLMHKQQLHFHPQTKHSMKLNVNQINDSNELKIKQQTEMKSESLKQLKLDQKN
3) MGIENRSANHMPNSLPSNATCDSGSQGMQQLNNQARSTATQNSSLQNISVTQRQ
151
387
77
335
550
130










Molecular Recognition Features






MoRF SequenceStartStop




1) WKGAVDWRT
6
14