<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14527

Description Uncharacterized protein
SequenceMAVTVPATTNMWDGVLEMTKSAQIKGVDPLMWAVELSSTLLSAGVSMPSTKVAELLVSHICWSNNVPIAWKFLEKALSIRVVPPMLVLALLSNRVIPSRRSHPAAYRLYLELLKRHIFPLATEVNGSNYHKIMESIDDALHLNQIFGFHSSEPGLVLVEFLFSVVWELLDASLDDENLLELVPEKKSLWPIKSQDMDIDDHNNYGENKVDYHQGLYKMNTITAIEIIGEIFRNKVTFRILHLARRNMPAHWGSFVQHLRLLVGNSTALRNSKDITPEALLQLTSDNRVLLSKECKTSSLQQFHAVMASGSLVSSAGQSYGACRSAIWLPIDLFLEDTMDGFVVATTSAAETLTDLLKAHQAITQASWQDTFLGLWIAALRLVQREGEAADGPIPRLDTCLCLLLCTTTLAVGNIIDEEENTLLEENDHKQMHQGNEMQALGNCRKSLVSSLQQLGDFEGLLIPPSSVTSIANQAAAKAILVASGISVGSGYLDGVSLNDMPNTCAGNLRHLIVEACIARNLLDTSAYLWPGYVKGHSNQIPRNISGQMTGWSTLMKGTPLTSQMMHTLVSTPASSLAEIEKIYGIAINGTEEEKIFAATVLCGASLTRGWNIQEHTGFFIIKLLSPPIPVDYSGNESHLIVYAPLLNVLLMGISTIDCVQIFSLHGLAPHLAAVLMPLCEVFGSCPPAVSWTLPNGEHLSPLSVFSNAFILLLKLWRFHQPPLEHFMGDVTPVGSQLNPELLLLAHNYPQNNQKARRGHFSNLSSTEPIFLDSFPKLTFWYRQHQACIASTLSDLKPGTSVYQIFDALLNMMFRNTKAGQSLSHSASGSSNSCGSIPEDCASRLKLPAWEILEAVPFVLDAALTACAHGNLSPPELITGLRELAIFLPASMATVVSYLSAETTRGLWKPASMNGTDWPSPAASLAMVENNINKILSATGVDVPSLSAGGTIPTLPLPLAALVSLTITYKVDRVSESVLNLAAPALNTLGASCPWPCMAIISALWVQKAKRWTDYLIFSASRTVFHHNSNAVVQLLKMCFKSAIAQPPVFSSGCVGGLLGHGFGSHSSGGIYPVAPGILYLRVHRSVGDVMFMTEEIVSLLMHTVKDIVSTDVPLEKLKKPNGLVMRYGEVSLSAAMTRIKQAASLGASLVWLTGRLNLIQSLLKETLPSWFISGHKSDQIKGDSGGMIGMLMGYALAYFAVLSGAFGWGVEPVSLYCKKRPVILGLHLEFMASALDGKISLGCNKATWRAYVSGFVSLMVTCAPKWAMEVDVAVLKRLSRGLRKWDEEELALTLLEISGVNAMGSAAEMIVESFCLGDCILK
Length1322
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.07
Grand average of hydropathy0.210
Instability index40.63
Isoelectric point6.22
Molecular weight143842.21
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14527
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     411.30|     136|     153|     988|    1139|       1
---------------------------------------------------------------------------
  988- 1139 (203.00/173.36)	LGASCPWPC..MAIISALWVQKAKRWtdyLIFSASRTVFHHNSNAVVQLLkMCFksAIAQPPVFSsgcvgGLLGHGFGSHSsggIY....PVAPGiLYLRVHRSV..GDVMFMTEE.........IVSLLMhTVKDIVSTDVPLEKLKKPNGLVMRYGEVSLSAAMTRI
 1145- 1297 (208.31/132.51)	LGASLVWLTgrLNLIQSLLKETLPSW...FISGHKSDQIKGDSGGMIGML.MGY..ALAYFAVLS.....GAFGWGVEPVS...LYckkrPVILG.LHLEFMASAldGKISLGCNKatwrayvsgFVSLMV.TCAPKWAMEVDVAVLKRLSRGLRKWDEEELALTLLEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.02|      13|      27|     369|     381|       2
---------------------------------------------------------------------------
  369-  381 (23.22/12.16)	DTFLGLWIAALRL
  397-  409 (24.80/13.49)	DTCLCLLLCTTTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.55|      23|      24|     675|     698|       3
---------------------------------------------------------------------------
  675-  698 (41.90/25.96)	LMPLcEVFGSCPPAV..SWTL..PNGEH
  699-  725 (33.65/15.49)	LSPL.SVFSNAFILLlkLWRFhqPPLEH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     196.37|      50|     596|       2|      61|       4
---------------------------------------------------------------------------
   11-   60 (83.52/63.37)	MWDGVL.....EMTK..SAQIKGVDPLMWAVELSSTLLSAGVSMPST..KVAELLVSHI
   73-  117 (52.61/32.64)	............LEK..ALSIRVVPPMLVLALLSNRVIPSRRSHPAAyrLYLELLKRHI
  528-  579 (60.24/31.16)	LWPGYVkghsnQIPRniSGQMTGWSTLMKGTPLTSQMMHTLVSTPAS..SLAEI.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.08|      42|     148|     262|     314|       5
---------------------------------------------------------------------------
  267-  308 (69.69/42.68)	ALRNSKDITPEALL......QLTSDNRVLLSKECK...TSSLQQ...FHAVMAS
  410-  463 (56.39/21.75)	AVGNIIDEEENTLLeendhkQMHQGNEMQALGNCRkslVSSLQQlgdFEGLLIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.96|      23|     148|     608|     654|       6
---------------------------------------------------------------------------
  500-  522 (42.91/12.76)	MPNTCAGNLRHLIVEACIARNLL
  628-  650 (41.05/10.36)	IPVDYSGNESHLIVYAPLLNVLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.15|      15|     152|     310|     326|       7
---------------------------------------------------------------------------
  310-  324 (27.49/18.77)	SLVSSAGQSYGACRS
  821-  835 (27.67/12.04)	SLSHSASGSSNSCGS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14527 with Med33 domain of Kingdom Viridiplantae
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