<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14523

Description Uncharacterized protein
SequenceMEMTKCAQSNGTDPLIWAAELSSSLISAGISLPSPEVAQLLVSHICWSNNVPIAWKLLEKAIAVRLAPPLLVLALLSNSVIPSRRSQPAAYRLYLELLRRLVIPSASEVNGPNYHEVMKAIDGALHLSQGFGIPSSEPGILLVEFIFVMVWRLLDASLDDEGLLELVPEKKSTLPVKPQAMEIDDHNIGAKKIDFNDRLFKSNTTIAIEVIGELYRNKVTSRILYLAHRNMPVHWGSFVYNLRLLAAKSISLRNSKHITPEALLQLTSDNRALVSLECKMVSLQQFHAVMASGSLVSPAGPTHNASHSVIWLPIDLFLEDIMEGTVVATTSAAETLTGLLKAHQAITQGSWQDAFLGLWIAALRLVQREEGAVEGPIPRLDACLCVLLCITTLAIVNIVDEEESALIEENEHGKMHMRSEKQVFGNCRKSLVSSLQQLGDFEGLLTPPSSVTSLVNQAAAKAMFFFSGLGVGSGYLDGVSLNDMPVTCAGDLRHLIVEACIARHLLDTSAYMWPGYVKGHTNQLPPRPVTGQMPGWSSLMKGSPLTSPMVHALVSTPASSLAEIEKLYGIATDGSIAEKISAATILCGASLTRGWNIQEHTGFFIIKLLSPPVPRDYSGTESHLLACAPYLNVLLLGITFIDCIHIFSLHGLVPQLAGVLMPICEVFGSCSPAVSWTLPTGEHLCPLAVFSNAFTLLLKLWRFDQPPFERVGDINPVGSQLTPEFLLLARNSQLSSCRNSLEAQKKRKRVFRQCDLASAGPVFLDSFPKLKFWYRQHQACIASTLSDLKPGTSVYQIFDALLNLMFRKINRGGQSLNCSTSGSSNSSGSVTDDCTLRLKLPAWDIMEAVPFALDAALAACAYGRLSPRELTTGLKDLADFLPASMVTIVSYLSAETTRGLWKPASMNGTDWPSPAANLSMVEKNINKILAETGVDVPSLFAGETSSATLPLPLAALVSLTITYKVDRITEPLLNLSGPALNTLGACCPWPCMPIIVALWTQKAKRWTDFLVFSASRTVFHQNNDAVVQLLRVCFQSILGLNSPSVVTNNGGIGNLLGHGYGSRCTGGMTPVAPGILYLRVHRSVRDLLFMTEEIVSLLIHSVKDILTTGIPIEKIKKPKSETVLRYGEVSLSAVMTRIKVAASLGASLVWITGGLNLVQTLIKETLPSWFISVHRSDQNKVDCGGMIGMLKGYALAYFTILSGAFAWGVDSASSASKKRPFILGAHLEFMVSALDGKISLGCNKATWRAYVSGFVSLMVLCTPKWVREVDVTVLRSLSKGLRKWDEEELALALLEIGGVGAMGAAAEFIIESSDLVM
Length1317
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.07
Grand average of hydropathy0.244
Instability index43.34
Isoelectric point6.99
Molecular weight142884.61
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14523
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     250.53|      82|     620|     265|     390|       1
---------------------------------------------------------------------------
   26-  112 (122.09/42.76)	ISAGiSLPSPEVAQLLVSH.ICWsnnVPIAW...KLLEKA.IAVRLAPPLLVLALLSNSVIPSRRSQPAAYRLYLELLrRLVIPSASEVNGP
  290-  376 (128.44/104.98)	MASG.SLVSPAGPTHNASHsVIW...LPIDLfleDIMEGTvVATTSAAETLTGLLKAHQAITQGSWQDAFLGLWIAAL.RLVQREEGAVEGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     350.19|     112|     556|     465|     595|       2
---------------------------------------------------------------------------
  465-  595 (168.05/169.06)	FFSGLGVGSGYLdgvslndmpVTCAGDLRHLIVEACIARHLLDTSAyMWPG..YVKGHTNqlpPRPVTGQMPGWSSLMKGS...PLTSPMVHALVSTPASslaEIEKLYGIATDGSIAEKISAATILcGASLTrgW
 1034- 1150 (182.14/127.33)	FQSILGLNSPSV.........VTNNGGIGNLLGHGYGSRCTGGMTP.VAPGilYLRVHRS...VRDLLFMTEEIVSLLIHSvkdILTTGIPIEKIKKPKS...ETVLRYGEVSLSAVMTRIKVAASL.GASLV..W
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.89|      30|     620|     600|     629|       3
---------------------------------------------------------------------------
  600-  629 (56.79/33.12)	HTGFFI......IKL.LSPPVPRDY.SGTESHLLACAP
 1226- 1263 (42.11/22.73)	HLEFMVsaldgkISLgCNKATWRAYvSGFVSLMVLCTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.64|      18|     895|       5|      22|       6
---------------------------------------------------------------------------
    5-   22 (35.71/22.01)	KCAQSNGTD.PLIW...AAELS
  902-  919 (24.26/12.48)	KPASMNGTD....WpspAANLS
  927-  945 (24.67/12.83)	KILAETGVDvPSLF...AGETS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.93|      18|     537|     261|     278|       7
---------------------------------------------------------------------------
  261-  278 (30.87/18.95)	EALLQL..TSDNRALVSLEC
  799-  818 (28.07/16.58)	DALLNLmfRKINRGGQSLNC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.83|      21|     884|     400|     420|       8
---------------------------------------------------------------------------
  400-  420 (38.31/31.17)	DEEE..SALIEENEHGKMHMRSE
 1285- 1307 (30.52/23.01)	DEEElaLALLEIGGVGAMGAAAE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14523 with Med33 domain of Kingdom Viridiplantae
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