<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14522

Description Putative reduced epidermal fluorescence 4
SequenceMAASIGTLRLWDNVLELTKKSQDKGSDPLLWAIHLSSQLNSAGVSLPSPDLANLLVSHICWDNNNPISWKFLEKALISNIVPPLLVLALLSTRIIPKRQTQPAAFRLYMELLKRHAFKLKSHVESRNYEVIMSSIDNVLHLSQIYGIEVKDPGSILLEFILSIVWQLVEAALEDEGLLELTGERKFKWNVPQDMELDGSGSYGGKRNEYQEILQRGNTLMAVELIGLFLQNKVTSRILFLARRNMPTHWRTLVQDIEVLAVNSSALRNSKVLTPEILLQSISDDRKIGSEETKANYLQEIQTIISSSSGISHKVSGSSLWISIDLALEDAMDGSQVDTTSAIEIITRLVKGLQALNDTRWYDCFLGLWMAALRLVQRERDPIEGPMPRLDTRLCMLLSITPLVVSDLLEDEDSAPQNNIYCQTTQDRKEDRRRELVSSLQILGDYHSLLTPPQPVIAAANQAAAKALMFVSGIDVGSSAYFDLVNMKDMANNFSGNLHHLIVETCIARNLLDTSAYFWPGYVTGHVNQIPHSMPAQVPGWSTFMKGAPLTPVMVNALVSEPASSLAELEKVFEIAVKGSDDEKVAAATILCGASLIRGWNVQEHSVYFITRLLSPPPPANYSGNDSHLIAYAPMLNVLLVGIAPIDCVQIFSLHGLVPQLAGSLMPICEVFGSCVANISWTLATGEEMSAHAVFSNAFALLLKLWRFNHPPLEYGVGDVPPVGSQLTPEYILLMRNSQLVSSGSVYEDRNRRRLSAVAKISCPDPIFLDSFPKLKAWYRQHQACLVSTLSGLRHSPVHQIVDSLLSMMFRKINGNKPLDFVSESSSSSLGSEDASLRPKLPAWDILEAVPFVVDAALTACTHGRLSPRELCTGLKDLADFLPASLAIIVSYFSAEVSRGVWKPVFMNGTDWPSPAANLSIVEEHIKNILAATNVNVPRLFAGISSPFTLPLPLAAFLSLTITYKLDTSSQRFLNLAGPALESLAAGCPWPCTPIVASLWTQKAKKWTDFLVFSSSRTVFLHDNHAVAQLLKSCFTVTLGLNNSLVSTHGDVGALLGHGFGSNLYGEMSPVAPGFLYLRVYRSIRDIMFLREDIISILLQCVKDIASNGKTPKGKHETKYGQVSVSASLTKVKLAAQLGASFLWISGGQGLVQSLINETLPSWFISAHKEETGGPVSMLSGYALGYFTVFCGAFAWGVDSSMSASKWRPRFLGSHMEFLASALNGKITLGCDPITWRSYVTGFVNSMAGCLPNWVAEVDIEILKRLSKGLVHWNEEELALKLLESGGVGTMGAAAELICQSDS
Length1302
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.08
Grand average of hydropathy0.119
Instability index45.55
Isoelectric point6.09
Molecular weight142800.04
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14522
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.68|      34|      85|     315|     365|       1
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  319-  352 (56.76/60.71)	LWI.SIDLAL..EDAMDG..SQVDTTSAIEI.ITRL.VKGL
  367-  407 (38.92/10.25)	LWMaALRLVQreRDPIEGpmPRLDTRLCMLLsITPLvVSDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     250.34|      84|     317|     618|     741|       3
---------------------------------------------------------------------------
  492-  533 (45.03/11.30)	NFSGNLHHLIVETCIARNLL......DTSAYFwpgYVTGHVNQIPHSM................................................................
  620-  714 (142.38/157.68)	NYSGNDSHLIAYAPMLNVLLvgiapiDCVQIF...SLHGLVPQLAGSLMP...IC...EVFGSCVANISwtlatGEEMSAHAVFSNAFA......LLLKLW..RFNHPPLEY
 1149- 1217 (62.92/23.87)	......................................GLVQSLINETLPswfISahkEETGGPVSMLS.....GYALGYFTVFCGAFAwgvdssMSASKWrpRFLGSHMEF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.57|      44|      85|     165|     212|       4
---------------------------------------------------------------------------
  165-  212 (73.98/55.92)	WQLVEAALEDegllELTGERKF..KWNVP................................QDMELDGS.GSYGGKRNEYQEI
  222-  300 (48.59/28.18)	VELIGLFLQN....KVTSRILFlaRRNMPthwrtlvqdievlavnssalrnskvltpeillQSISDDRKiGSEETKANYLQEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     172.08|      42|      85|     945|     986|       5
---------------------------------------------------------------------------
  945-  986 (71.16/41.77)	SPFTLPLPLAAFLSLTITYKLD...TSS...QR..F.LNLAGPALESLAAG
  989- 1029 (47.10/25.10)	WPCT.PI.VASLWTQKAKKWTDflvFSS...SRtvF.LH.DNHAVAQL...
 1032- 1073 (53.81/29.74)	SCFTVTLGLNN..SLVSTHG.D...VGAllgHG..FgSNLYG.EMSPVAPG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14522 with Med33 domain of Kingdom Viridiplantae
Unable to open file!