<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14518

Description Putative U-box domain-containing protein kinase family protein
SequenceMARMSGIRYPVVDTSGIMEIVEDKVYVAVGKNMKESQSTLRWALHNSGGRQICILHVHQPAEKMNILGTNFSINELEASKVEAYHETERQDMRRLLDRYNKTCQQTGVSAELHPIEMDSIEKGIVEFILQHNVRRLVMGGAADKHYSKKMVDLKSKKAIYVRLLAHPSCQIQFICKGNLIFTRPARLDGVGVAISSPSRLPNTNSSSVESSLRSRSITEGHSNTLPLTSPTPDYRRVMSDNRGTRISPNSAGELTLTTRLPSGRTYDEWGGISQRSPSTGSRFSTCSSEMADDSGLIPYATSEADSDYGSVPRFKDDVLNPSPPSVLERGMNDELYDQLIQAMAEADNSKRDANDESIKRRKAEIDAIMAKRRVKEYENLYAEELRRRLEIDEAFKKTNEEHENIKRELDEVSEELRMALEQKLVLESQIADSVQTVQDLERKMFDAVELLHKYKKERDDMQVECDDALRLLEETREKQAEEASCSSASQFYTEFSFSEVKEATRNFDPSLKIGEGGYGSIFRGFIRHTEVAIKMLHSHSLQGPTEFQQEVNILSRLRHPNLVTLIGACTDAWIIIYEYLSGGSLEDRLNCKGNTPPLSWQTRIRIAAELCSVLIFLHSCDIVHGDLKPANILLDKNSVTKLSDFGICRVLSQNELSSNNTSYCCRTDPKGTFVYMDPEFLSTGELTSKSDTYSFGIILLRLLTGRPALRLQMEVQQAINEENLKNILDPTAGDWPFVQAQQLALLAMNCCDVRKNRPDLASEAWRVLAPMRVSCGLPSFEFGSERQCAIPHYFICPIFQEIMQDPVVAADGFTYEAEALRGWLDSGRNTSPMTNLELANSNLVPNHALRSAIQEWLQQA
Length860
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.07
Grand average of hydropathy-0.443
Instability index54.46
Isoelectric point5.58
Molecular weight96901.64
Publications
PubMed=28538728

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14518
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.04|      15|      19|     439|     457|       1
---------------------------------------------------------------------------
  439-  453 (25.20/22.21)	DLERKMFDAVELLHK
  460-  474 (25.84/11.13)	DMQVECDDALRLLEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.17|      14|      19|     383|     396|       2
---------------------------------------------------------------------------
  390-  409 (15.52/ 6.59)	EIDEAFKktneehENIKREL
  411-  424 (18.66/ 9.31)	EVSEELR......MALEQKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     102.51|      22|      58|     199|     220|       3
---------------------------------------------------------------------------
  199-  220 (34.63/21.95)	RLPNTNSSS....VESSLRSRSITEG
  224-  249 (30.60/18.47)	TLPLTSPTPdyrrVMSDNRGTRISPN
  259-  280 (37.28/24.26)	RLPSGRTYD....EWGGISQRSPSTG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.08|      16|      21|     332|     351|       4
---------------------------------------------------------------------------
  332-  351 (22.77/27.57)	NDElydqLIQ.AMAEADN..SKR
  354-  372 (18.30/10.17)	NDE....SIKrRKAEIDAimAKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.65|      22|     414|     159|     184|       5
---------------------------------------------------------------------------
  159-  184 (34.75/35.68)	IYvRLLAHPSCQIQFICKGNlifTRP
  576-  597 (42.91/28.59)	IY.EYLSGGSLEDRLNCKGN...TPP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14518 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SRLPNTNSSSVESSLRSRSITEGHSNTLPLTSPTPDYRRVMSDNRGTRISPNSAGELTLTTRL
2) TYDEWGGISQRSPSTGSRFSTCSSEMADDSGLIPYATSEADSDYGSVPRFKDDVLNPSPPSVLERGMNDE
198
265
260
334










Molecular Recognition Features






MoRF SequenceStartStop




NANANA