<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14516
Description |
Putative mediator of RNA polymerase II transcription subunit 12 |
Sequence | MQRYHATNCTSAVNNSAVGGSLGRDTSRAESSALPANFQSNRRPSQLAPYKLRCEKDPLNSRLPPPDFHPPTTNCPEETLTKDYVLAGYRETVEGLEESREISLSQISTFTKPVILKCKEAIRKYHRAINESRAQKRKAGQVYGVPLTGNLLSKPGVFPEQKASGEDFRKKWIEGLSQQHKRLRSLADHVPHGYRKKALFEVLIRNNVPLLRATWFIKVTYLNQVRPGSSSTSSGSPDRTRFSRSEQWTKDVIEYLQHLLDEFVQKSNSHSTLHIKDRSPQFAYGGSIQHKNDLVSAVDSDEPSLHFKWWYVVRIIQWHYAEGLLLPSLIIDWVLNQLQEKELLVILQLLLPIIYVVIESMVLSQNYVHILVGIAVRFIQEPSPGGSDLVDNSRRAYTITALVEILRYLLLAVPDTFVAQNCFPLPSCVVLNAPNDGSLITRVTGEQQLSINSVVYSIRKRATNLSKVAKPDYSGHNVAKVVHELDKALIHGDITIAYKCMFEDFCDETFDKRWIADVSTCLRSSLKWIGTVGSSFMCSVFFICEWATCDFRDFRVGPPRGIKFSGKRDFSQVYVATRLLEMKTRNMRSSSRPKAGVRKVKDLSQFFQSPGPLHDIIVCWIDQHQAQSGEGFKRVQLLINELIRSGIFYPQAYVRELIVSGIMGMVDFDRKRRHFKLLKHLPGLYIQDALQEAQIAETSLITEAMHIYSNERRLLLHELVDHPKNNIVSNKPKNHQKFVKDQWPVPSPSNANRKIEEVMNSIAVLLHFSNSQSTIGNGSEESRDVKRTTGPMVISEMTPGCEECRRAKRQKVEEKSPYPYLSDDEDIWWLKKGQTLKSMESFRAIEPPVKPVKQATRGRQKTVRKTSSLAQLAAARIEGSQGASTSHVCDSRVNCPHHRNGISNNDSDVPKTTDSVTTVHLGDASSIGNVLKRVPLDEKRVVVVWLMGTVRQLVDEAGKITETAPKVGHFGRNSSPVDDKGSAKWKLGEDELSTILYLMDVCDDLVSAARFLVWLLPKIPINPIPTVHGGRNVMIVPRNVENQLCSVGETFVLSSLRRYENILAAANLIPETLSSMMNRASVVMASNGRVSGSAALVFARQMLKKYGHVATVGDWIKNFKTTADKRLVMELESGRSSDGEFGLPLGVPAGVQDFDEFLLKKISGVRISRVGLSMRDIVQRLVDEAISAFYGQEKKSFTGGPMKKPTVQKPDDGYLTAQQVVKGLMDCMRQTGGAAQEGDPTLVAFAVSAIVSNVGQVIAKITEITPVSLTFSRHIIRVHLTCLSLLKDALGERQSRVFEIALATEASSALSQVFSPPKASRGQLQLSPETRDPMSNENPTFSKAAKTTGAISALVIEAVLQGITSLERMVTVLRLKDGINVIQFLKSTRSNSNGNVRSIGDLKAENLVEVSVHWFRVLVGNCRTVSDGFIVDLLGESSIVALSRIQRVLPINLVFPPAFAIFGFLVWKRFIFNANIMARDNISQLFHSLRSAISDAIKHLPFRDVCLRECATLYDLVAADTSDSEFAEMLDLSGPDMHSKISAFVPLRARIFLNSIIDCQLPNEIISHDDGNRADLNEMKLLDRLVHILDTLQPAKFHWQWVELRLLLNEQALIGKVEARDTSLAEALRSFSPNNENVSDNENNFIQMVLTRLLVRPDAAPLFSEVVHLLGRSLEDEVLQQAKWFLRGHDVLFGRKSIRQRLINIAESKSLSTKIQFSKPWGWCNNNLSPMPGPVKKGNKRKFESVSLEEGEVVDDGNGTGPDTKRHSSRTFGPVSDVEAFIVSQQHVTEKALVELLLPCIDQSSNDSRFTFASDLIKQMNDIEQQISNVTHGVNKLLPVVSGGIEGPVTKVNTRKGLRGSSPGLARRLAGPVEMMLPSPSALRASISLRLQLLLRLLPVICADGEPSFRSLRHMLASVVLRLLGSRVVHEDADLYNPTSASVDLGESLYDRLLLVLHALLSTSQPYWLRPKSSSKATSEGSRDSNPYDREVAEKLQNELDGMQLPDAVRWQIQTVMPFVFHTARFSISCQPPNVPLSALGLLQPSVSIPIPHPGNHRNSQGPSSRAMSNGPGKASNSKPVSSQPDSDIEIDPWTLLEDGAGSGPSSINAAAIAGTDHANLKASSWLKGAVRVRRMDLTYIGAIDDDS |
Length | 2148 |
Position | Kinase |
Organism | Helianthus annuus (Common sunflower) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> campanulids> Asterales> Asteraceae> Asteroideae>
Heliantheae alliance> Heliantheae> Helianthus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.229 |
Instability index | 46.52 |
Isoelectric point | 9.01 |
Molecular weight | 238773.74 |
Publications | PubMed=28538728
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP14516
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.59| 13| 29| 505| 521| 1
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505- 521 (22.48/23.51) F.CDETFDKRWiadvSTC
536- 549 (23.10/13.11) FmCSVFFICEW....ATC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 369.80| 121| 1179| 558| 684| 2
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559- 684 (198.31/147.15) PRGIKFSGKRDFSQVYVAT.RLLE....MKTRNMRSSSRPKAGVRKVKD..LSQFFQSPGPLHDIIV.CwIDQHQAQSgeGFKRVQLLINEL..IRSGIFYPQAYVREL..IVS.GIMGMVDFDRKRRHFKllKHLPGL
1732- 1865 (171.49/106.84) PGPVKKGNKRKFESVSLEEgEVVDdgngTGPDTKRHSSRTFGPVSDVEAfiVSQQHVTEKALVELLLpC.IDQSSNDS..RFTFASDLIKQMndIEQQISNVTHGVNKLlpVVSgGIEGPVTKVNTRKGLR..GSSPGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 249.06| 52| 129| 1158| 1209| 3
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1102- 1153 (61.58/41.85) MLKKYG..H.....VATV.GDWIKNFKttadKRLVMELES...GRSSDG........EFGLPL..GVPAgVQD
1158- 1209 (84.17/60.51) LLKKISGVR.....ISRV.GLSMRDIV....QRLVDEAISAFYGQEKKS........FTGGPM..KKPT.VQK
1214- 1262 (49.15/31.58) YLTAQQVVKglmdcMRQT.GGAAQEGD....PTLVAFAVSAIV.....S........NVGQVI..AKIT....
1285- 1343 (54.17/35.73) LLKDALGER.....QSRVfEIAL........ATEASSALSQVFSPPKASrgqlqlspETRDPMsnENPT.FSK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 146.47| 46| 516| 227| 273| 4
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227- 273 (74.69/63.25) PGSSSTSSGSPDRTRFSRsEQW.......TKDVIEYLQHLLDEFVQKSNSHSTL
723- 775 (71.77/55.17) PKNNIVSNKPKNHQKFVK.DQWpvpspsnANRKIEEVMNSIAVLLHFSNSQSTI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 276.47| 94| 341| 1547| 1662| 9
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1497- 1606 (142.42/114.26) IKHLPFRDVCLRECATLYDLVAADTSDSE..FAEML...DLSGPDMHskisafvpLRARIFLNSIIDcQLPNEIISHDD..GNRAdlnemkLLDRLVHILDT......LQPAKfHWQWVELRL
1614- 1728 (134.05/91.65) IGKVEARDTSLAEALRSFSPNNENVSDNEnnFIQMVltrLLVRPDAAplfsevvhLLGRSLEDEVLQ.QAKWFLRGHDVlfGRKS......IRQRLINIAESkslstkIQFSK.PWGWCNNNL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 229.44| 70| 1179| 880| 951| 10
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880- 951 (118.00/75.97) SQGASTSHVCDSRVNCPHHRNGISNNDSDVPktTDSVTTVHLGDAS..SIGNVLKRVPLDEKRV.VVVWLMGTVR
2060- 2132 (111.44/66.22) SQGPSSRAMSNGPGKASNSKPVSSQPDSDIE..IDPWTLLEDGAGSgpSSINAAAIAGTDHANLkASSWLKGAVR
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