<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14506

Description Putative U-box domain-containing protein kinase family protein
SequenceMVLLWFGINMEDNEVIKGVDELSTPSCLVVGLAVSESRKTKYVVRWALDKFVPEGMLLFKMFFIRPKITRIPTPMGSVLISQVREDVVNAYKKEVEWQTYEKLLPFKHMCDRRKVDVEIVQIESDDVVEAIKHEILKNNINKLVIGASSKGIFSRGKNLSSKISESIPSFCTVYAISKGKLSSLRASDSETIGSSKDDNHSSDSSSVTNSSSLATSSRTEWTDQGSATSYSQFFPNSLPTPCFETPSFKNGTLHKETSSSESSGNKFFDGGEGDESHETTVSYAGNPDYFRANSTVSSSRSFLTENQSWTSDQDCIAYAPSEISSEIQDNNINFEIEKLRVELRHFRGMYALAQNETFDASRRLSDLQKQQLEESIRLKDLKLKEEEAKSLAQKEMEQHEAAKRQAEYVKENLRREAAIRKGAEEKALHESREKQKLRNAITGASLHYRKFTWEEIVAACSSFSDDLKIGTGGNGTVYRSNFHHTVAAVKVLHSQEAHRTKQFQQELEVLSKIRHPHLLILIGACVDHGCLVYEYMVNGSLEERLFRKNNTPPIPWFDRFRITWEVASALIFLHNAKPKSIVHRDLKPANILLDQNMVSKIGDVGLSTMLQSDVSSTTTVYKDTSPAGTLCYIDPEYQRTGLVSPKSDVYALGIVILQLLTARPAIAVTHVVETALEDDELANVLDPEAGEWPTDETKELAVLALSCAELKRKDRPDLKDTVLPVLERLKAVADAAQRAASASKTQISIPNHFRCPILKEVMGDPCVAADGYTYERVAVEKWLEESDCSPMTNLPLTSRSLTPNYTLLSAILEWKSRT
Length818
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.07
Grand average of hydropathy-0.399
Instability index42.89
Isoelectric point5.94
Molecular weight91650.64
Publications
PubMed=28538728

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14506
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.88|      26|      38|      78|     103|       1
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   78-  103 (44.69/32.75)	VLISQVR.EDVVNAYKKEVEWQTYEKL
  117-  143 (38.18/26.93)	VEIVQIEsDDVVEAIKHEILKNNINKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.74|      34|      38|     352|     389|       2
---------------------------------------------------------------------------
  352-  389 (48.19/51.20)	LAQN..ETFDASRRLSDLQKQQLEESIRLKdlklKEEEAK
  391-  426 (49.56/40.41)	LAQKemEQHEAAKRQAEYVKENLRREAAIR....KGAEEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     135.68|      29|      33|     259|     287|       3
---------------------------------------------------------------------------
  225-  252 (45.28/24.76)	GSATSYSQFFPNSLPTPCFETP.SFKNGT
  259-  287 (49.35/27.60)	SSESSGNKFFDGGEGDESHETTVSYAGNP
  294-  320 (41.05/21.80)	STVSSSRSFLTENQSWTSDQDCIAYA..P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     162.79|      53|     581|     161|     218|       4
---------------------------------------------------------------------------
  161-  218 (79.39/60.41)	SKISESIPS.F.CTVYAISKGklSSLRASDSETIGSSKDDN..HSSDSSSVTNsssLATSSR
  743-  799 (83.41/50.70)	SKTQISIPNhFrCPILKEVMG..DPCVAADGYTYERVAVEKwlEESDCSPMTN...LPLTSR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14506 with Med32 domain of Kingdom Viridiplantae
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