<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14492

Description Uncharacterized protein
SequenceMSASSGTVAHNNNNNNNNKDSEEEEDSSSATAAAADPVSDSDMDKAAGDPMDEDVVNPATVFCIRLKQPSSNLQFKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTESTVFNVIADSPRDSVQFIEWSPSSCPRALLIANFHGRITIWTQPSQGSASLVKDASCWQREHEWRQDIAVVTKWLSGVSPYRWLSSRSHDSTKSTFEEKFLSEQPQAPAGWPNFLCVCSVFSSGSIQLHWSQWPANQSGTFKWFCTSKGLLGAGPSGIMAADAIVTDSGALHVAGVPIVNPSTVVVWEVTPGPGNGFQSTPKTSTSNGNYGIPPSLNPPSWDGFAVLASYLFSWQDYLVLEAKQGKKQTEEDYSDMVALHCSPVSNFSAYVSPEASAQSAATTTWGSGVTAVAFDPTCGGSVIAIVIVEGQYMSPYDPDEGPSITGWRVQRWKSSLEPVVLHPIFGNPTSSFGGQPPMQTVWVTKVNKSIPATDYIKNNQSAPTASTSNTSESDTEKSKRVVFDPFDLPSDVRTLARIVYSAHGGEVAVAFLRGGIHIFSGSSFTPVDNYHIDVVSAIASPAFSSTSCCSATVWHDTVRDCTMLKIIRVLPPAVPSSQVKANSSTWERAIAERFWWSLMVEVDWWDAVGCTQSAAEDGIVSLNNVIAVLDADFHSLPSTQHRQQYGPDLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVVEPWLASGETLNSLDHESMAVEPALMLDIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVSSGTGGSRNLVTSPTQSTGSPGVAQGGQNASASSTASTPIQAWVQGAIAKISSTSDGVPNATPNPVTGPSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRIHLPRFLGASQRNNTDSTVHKHQPGKVEEVNSVSTKVASTLGRSEELTVSRAGQAGSGAKGSEDGPSNRSRYGSGNAGQGYTFDEVKVLFLILMDLCKRTSGLAHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQHMPRPRGADAAGLLLRELELHPPAEEWHRRNTFGGPWSDPDDLGQTTSTDSASFSSLDSNDVRQEAQQLWPRKRRLSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLGGVWYKCIRCLRQTCAFDSQGGSNNTSTQNEQEAWWISRWVHGCPMCGGTWVRVV
Length1233
PositionTail
OrganismHelianthus annuus (Common sunflower)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> campanulids> Asterales> Asteraceae> Asteroideae> Heliantheae alliance> Heliantheae> Helianthus.
Aromaticity0.08
Grand average of hydropathy-0.214
Instability index47.06
Isoelectric point5.81
Molecular weight133245.87
Publications
PubMed=28538728

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14492
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     134.87|      38|      79|    1092|    1131|       1
---------------------------------------------------------------------------
 1092- 1131 (66.43/48.88)	WhrRNTFGGPWSD.PDDLGQTTSTDSASFSSLDSNDVRQEA
 1174- 1212 (68.44/43.47)	W..KTGLGGVWYKcIRCLRQTCAFDSQGGSNNTSTQNEQEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     258.19|      86|     112|     789|     900|       2
---------------------------------------------------------------------------
   90-  134 (57.91/17.99)	AWCgkLNAIACASETCARIPSSNANP...P.FWIPIHIVIPERPTESTV.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
  789-  831 (54.73/32.52)	.................................................fnviadsprdsvqfiewspsscprallianfhgritiwtqpsqgsaslvkdascwqrehewrqdiavvtkwlsgvspyrwlssrshdstkstfeekflseqpqapagwpnflcvcsvfssgsiqlhwsqwpanqsgtfkwfctskgllgagpsgimaadaivtdsgalhvagvpivnpstvvvwevtpgpgngfqstpktstsngnygippslnppswdgfavlasylfswqdylvleakqgkkqteedysdmvalhcspvsnfsayvspeasaqsaatttwgsgvtavafdptcggsviaivivegqymspydpdegpsitgwrvqrwksslepvvlhpifgnptssfggqppmqtvwvtkvnksipatdyiknnqsaptastsntsesdtekskrvvfdpfdlpsdvrtlarivysahggevavaflrggihifsgssftpvdnyhidvvsaiaspafsstsccsatvwhdtvrdctmlkiirvlppavpssqvkansstweraiaerfwwslmvevdwwdavgctqsaaedgivslnnviavldadfhslpstqhrqqygpdldrikcrllegtnaqevramvldmqarllldmlgkgiesalvnpsalvvepwlasgetlnsldhesmavepalmldiqayvdavldlasHFITRLRRYASFCRTLASHAVSSGTGGSRNLVTSPTQSTGSPG
  851-  946 (145.55/88.75)	AWV..QGAIAKISSTSDGVPNATPNPvtgPsSFMPISINTGTFPGTPAV........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................rligdcHFLHRLCQLLLFCFFFRRIHLPRFLGASQRNNTDSTVHKHQPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.74|      31|     430|     309|     360|       3
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  309-  339 (57.35/16.82)	IVNPSTVVVWEVTPG...........................PGNGFQSTPKTSTSNG
  362-  419 (39.39/34.24)	LFSWQDYLVLEAKQGkkqteedysdmvalhcspvsnfsayvsPEASAQSAATTTWGSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     208.72|      49|     392|     214|     269|       5
---------------------------------------------------------------------------
  143-  200 (71.67/32.74)	RDSVQ..FIEWSPSSCPRAllIANFHGRITIWTQPSQGSASLvkdasCWQrehEWRQDIA
  220-  269 (86.49/57.33)	HDSTKsTFEEKFLSEQPQA..PAGWPNFLCVCSVFSSGSIQL.....HWS...QWPANQS
  271-  308 (50.56/21.79)	......TF.KWFCTSKGLL..GAG.PSGIMAADAIVTDSGAL.....HVA...GVP....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.57|      11|      52|     718|     731|       7
---------------------------------------------------------------------------
  700-  711 (15.27/ 7.54)	LDrIKCRLLEGT
  721-  731 (19.29/ 7.49)	LD.MQARLLLDM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.73|      10|     566|     646|     661|      10
---------------------------------------------------------------------------
  646-  661 (16.61/18.81)	WWslmveVDWWdAVGC
 1213- 1222 (26.12/11.06)	WW.....ISRW.VHGC
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14492 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LTVSRAGQAGSGAKGSEDGPSNRSRYGSGN
2) MSASSGTVAHNNNNNNNNKDSEEEEDSSSATAAAADPVSDSDMDKAAGDPMD
3) RRNTFGGPWSDPDDLGQTTSTDSASFSSLD
968
1
1094
997
52
1123










Molecular Recognition Features






MoRF SequenceStartStop




NANANA