<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14477

Description Uncharacterized protein
SequenceMAEKQLIVAVEGTAAMGPYWSTIISDYLDKIIRCFCGNELSGQKPSTSTVELSLVTFYTHGSYCGCLVQRSGWTRDLDLFLQWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGNQNQQNVDCQKHCILLAASNPHPLPTPVYRPQMQNLEQNEIIDSQTENRLYDAEAVAKSFPQCSVSMSVICPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPQFLVLISENFLEARATLSRPGSTNLPSNQSPVKMDIAPVASVTGPPPTSVPSVNGSVMNRQPVAVGNVPPATVKVEPSTVSSMVAGPAFPHIPSVRPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPVVSGVTHPSRPVGSILNNISQARVMNSAALTGGTSIGLQTMGQNPMAMHVSNMISSGMASSVGAAQNVFSSSGSGTLTQVAQNSGLSSFTSANSNVSGNNNLGISQPMSNLQGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSSGSSSGTGTMIPTPGMPQQVQAGIQSLGANNSSAPNVPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQVGGQQQQQQQMQQQQPQQHPQLQQQQQQHPQLQQQQHPQLQQQQQQQQLQQQQQHPQMQQQQQQQQHPQMQPQQQQHPQMQPQQQQHPQMQQQPQQHPQLQQQQQQHPQLQQQQQQHPQLQQQQQIPQLQQQQQQQQLPQLQQQQQLPQLQQQQLPQLQQQQLSQLQSQQQLPQLQQLQQQHQQQQLVGTGMGQAYVQGRSQLVSQGQVPSQGSNMPGGGFMG
Length896
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.04
Grand average of hydropathy-0.595
Instability index69.74
Isoelectric point8.73
Molecular weight97494.50
Publications
PubMed=23525075

Function

Annotated function 
ECO:0000256
GO - Cellular Component
mediator complex	GO:0016592	IBA:GO_Central
transcription regulator complex	GO:0005667	IBA:GO_Central
GO - Biological Function
DNA binding	GO:0003677	IEA:EnsemblPlants
GO - Biological Process
defense response to fungus	GO:0050832	IEA:EnsemblPlants
jasmonic acid mediated signaling pathway	GO:0009867	IEA:EnsemblPlants
positive regulation of defense response	GO:0031349	IEA:EnsemblPlants
positive regulation of flower development	GO:0009911	IEA:EnsemblPlants
positive regulation of transcription by RNA polymerase II	GO:0045944	IBA:GO_Central
red, far-red light phototransduction	GO:0009585	IEA:EnsemblPlants
response to far red light	GO:0010218	IEA:EnsemblPlants
response to red light	GO:0010114	IEA:EnsemblPlants
trichome branching	GO:0010091	IEA:EnsemblPlants
trichome papilla formation	GO:1905499	IEA:EnsemblPlants

Interaction

Binary Interactions











Repeat regions





Repeats
>MDP14477
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     283.73|      34|      37|     678|     712|       1
---------------------------------------------------------------------------
  690-  726 (76.88/17.12)	QQHPQLQQQQQQHPQLQQ..QQH.PQlqqQQQQQ..QLQQQQ
  727-  747 (48.51/ 7.20)	.QHPQMQQQQ......QQ..QQH.PQ...........MQPQQ
  748-  778 (60.53/12.80)	QQHPQMQPQQQQHPQMQQqpQQH.PQ...LQQQQ..Q.....
  779-  811 (49.40/ 8.91)	.QHPQLQQQQQQHPQLQQ..QQQiPQlqqQQQQQ..QL....
  812-  842 (48.41/ 8.56)	...PQL.QQQQQLPQLQQ..QQL.PQ...LQQQQlsQLQSQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     256.08|      37|      75|     385|     421|       2
---------------------------------------------------------------------------
  247-  274 (29.53/ 8.04)	........QSP.VKMDI.....APVA.SVTGP....PPtSV.P........S...VNGS
  332-  361 (35.92/11.67)	SQ...EMTTNN.ENVPDLKPVVSGVT.HP.......SR.PV................GS
  386-  421 (60.38/25.53)	.Q...TMGQNP.MAMHVSNMISSGMA.SSVGA....AQ.NV.F........S...SSGS
  423-  446 (26.87/ 6.53)	.....TLTQVA......QN...SGLS.SFTSA....NS.NV...............SGN
  458-  501 (39.90/13.92)	LQggvSMGQSV.PGMSQGNLSGPQMVqSAIGM....NP.NM.M........SalgSSGS
  505-  542 (30.06/ 8.34)	TG...TMIPTPgMPQQVQAGIQS......LGAnnssAP.NVpL........S...QQTS
  545-  583 (33.41/10.24)	LQ...SAQSKY.VKVWEGNL..SGQR.Q........GQ.PV.FitrlegyrS...ASAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.11|      21|      48|     615|     635|       3
---------------------------------------------------------------------------
  615-  635 (36.53/17.30)	DFLVFRAMNQHGFLGQLQEKK
  636-  654 (21.09/ 6.69)	LCAVIQLPSQ.TLLLSVSDK.
  666-  682 (29.49/12.46)	DMVVFKP..QVG..GQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.46|      40|     116|     171|     213|       4
---------------------------------------------------------------------------
  137-  187 (64.02/34.60)	PHPLPT..PVYRPQMQNLEQNE.IIDsqtenrlydaeAVAKSFPQCSVSMSVIC
  188-  239 (50.44/35.67)	PKQLPKlrAIYNAGKRNPRAADpPID..naknpqflvLISENFLEARATLSRPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.97|      21|      28|     844|     866|       5
---------------------------------------------------------------------------
  844-  866 (34.04/18.10)	QLpqLQQLQQQHQQQQLVGTG.MG
  875-  896 (35.93/13.41)	QL..VSQGQVPSQGSNMPGGGfMG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14477 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATLSRPGSTNLPSNQSPVKMDIAPVASVTGPPPTSVPSVNGSVMNRQPVAVGNVPPATVKVEPSTVSSMVAGPAFPHIPSVRPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPVVSGVTHPSRPVGSILNN
2) QQQQQLQQQQQHPQMQQQQQQQQHPQMQPQQQQHPQMQPQQQQHPQMQQQPQQHPQLQQQQQQHPQLQQQQQQHP
3) QQQQQQMQQQQPQQHPQLQQQQQQHPQLQQQQHPQL
4) QVAQNSGLSSFTSANSNVSGNNNLGISQPMSNLQGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSSGSSSGTGTMIPTPGMPQQVQAGIQSLGANNSSAPNVPLSQQTSS
233
717
678
426
365
791
713
543










Molecular Recognition Features






MoRF SequenceStartStop




NANANA