<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14476

Description Uncharacterized protein
SequenceMASPAWLPQEVKPSVSQSPVSVSPAGGASTQTSASLASSVGLHTSNSSGGSTTDSIQEPLQAKFSNAPSFAVPASSFSYGVPPNANISFGASQQSSPGSAIQSNPPASPRVQPPVPGLSSSASPSFSYNIPKSGFSFPNNQQFQSGMNIPPAVAQETGNVSLSSTSSHSGSLPAPTSSSSTMNLSSAPNMGTTTSWVPTGPSFNLTSGMPGTPGTPGPPGIAHPVQISFNPTAPSAPIDSSSVALRPSMQIAPVASSAVQPQVGAPYLSLSSMGAPPQGVWLQSPQIGGFPRPPFLPYPAAFPGPFPLPAHVMPLPSVPLPDSQPPGVIPVGNTAAISSPSAASGHQLAGSSGIQIELPHPGIGNENRASVNEQLDAWTAHKTETGVVYYYNALTGESTYDKPPGFKEEPDKVSMQPTPVSTVNLSGTDWVLVTTSDGKKFYHNGKTKVSSWQIPNEVIELRKKQDADVPKEHPVSIPINNVMTEKGSAPISLTAPAINTGGREAMAFKPSAVQGTSSALDLIKKKLQDSGAPVTSSPVPAPSESNGSRGVESTPKGQQSDNSKDKLKDINGDGNLSDSSSDSEDADSGPTKEECITQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDHKTDYQSFRKKWANDPRFEALDRKDREHLLNERVLPLKRAAEEKAQAVRAAAATSFKSMLQEKGDITVSSRWSREKLRERERELRKRKEREEQETERVRLKVRRKEAVATFQALLVETIKDPQASWTGSKPKLEKDPQRRAANPDLEPSDMEKLFREHIKRLNERCAHEFRALLAEVLTAEAASQETEDGKTVLNSWSTAKRLLKPDPRYNKMARKEREVLWRRFSEEMLRKQKSALDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR
Length947
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-0.680
Instability index60.39
Isoelectric point9.17
Molecular weight102320.21
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14476
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     418.13|      57|      57|      65|     121|       1
---------------------------------------------------------------------------
   13-   63 (37.65/10.31)	..................PSVSQSpVSVSPagGASTQTSASL.A.SSVGlhTSN..SSGGSTTDSIQE.P.....LQAK
   65-  121 (102.70/41.15)	S.NAPSFA..V.......PASSFS.YGVPP..NANISFGASQ.Q.SSPG..SAI..QSNPPASPRVQP.PV..PGLSSS
  123-  165 (58.02/19.97)	S...PSFSynI.......PKSGFS.F...P..N.N......Q.Q.FQSG..MNI.....PPAVAQETG.NV...SLSST
  167-  224 (77.21/29.07)	S.HSGSLP..A.......PTSSSStMNLSS..APNMGTTTSWvP.TGPS..FNL..TSGMPGTPGTPG.P...PGIAHP
  230-  269 (40.52/11.67)	NpTAPS....A.......PIDSSS.VALRP..SMQIA......................PVASSAVQP.QVgaPYLS..
  313-  366 (60.04/20.93)	M.PLPSVP..L.......PDSQ.......P..PGVIPVGNTA.AiSSPS..AASghQLAGSSGIQIEL.PH..PGIGNE
  370-  426 (41.99/12.37)	.......S..VneqldawTAHKTE.TGVVY..YYNALTGEST.Y.DKPP..GF....KEEPDKVSMQPtPV..STVNLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.34|      14|      15|     552|     565|       2
---------------------------------------------------------------------------
  552-  565 (24.95/15.86)	ESTPKGQQSDNSKD
  569-  582 (24.39/15.31)	DINGDGNLSDSSSD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     389.79|      65|      66|     653|     717|       3
---------------------------------------------------------------------------
  596-  648 (70.18/36.36)	...........ITQFKEMLKE..RGV.APFS...KWEKELPKIVFDPRFKA....IPSHSARRS...LFEHY.VKTRA
  653-  717 (105.73/58.44)	KEK.RAAQKAAIEGFKQLLDEASEDI.DHKT...DYQSFRKKWANDPRFEA....LDRKDREHL...LNERV.LPLKR
  720-  782 (81.77/43.56)	EEKaQAVRAAAATSFKSMLQE.KGDI.TVSS...RWS..REKLRERER.EL....RKRKEREEQ...ETERVrLKVRR
  783-  839 (70.49/36.55)	KE........AVATFQALLVET...IkDPQA...SWTGSKPKLEKDPQRRAanpdLEPSDMEKL...FREHI....KR
  846-  908 (61.62/31.04)	HEF.RALLAEVLTA.....EAASQETeDGKTvlnSWSTAKRLLKPDPRYNK....MARKEREVLwrrFSEEM.L....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.91|      19|      21|     454|     474|       4
---------------------------------------------------------------------------
  454-  474 (29.60/24.19)	IP.NEVieLRKKQDADVPKEHP
  477-  496 (29.31/17.12)	IPiNNV..MTEKGSAPISLTAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.77|      28|     394|     518|     550|       6
---------------------------------------------------------------------------
  518-  550 (44.10/31.32)	SALDLIKKKLQD..SGAPVTSSPVPApsesnGSRG
  913-  942 (46.67/22.88)	SALDHKEDRKTDakSRSSVDSGRVPF.....GSRG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14476 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ALDLIKKKLQDSGAPVTSSPVPAPSESNGSRGVESTPKGQQSDNSKDKLKDINGDGNLSDSSSDSEDADSGPTKEECITQFK
2) ANISFGASQQSSPGSAIQSNPPASPRVQPPVPGLSSSAS
3) FPNNQQFQSGMNIPPAVAQETGNVSLSSTSSHSGSLPAPTSSSSTMNLSSAPNMGTTTSWVPTGPSFNLTSGMPGTPGTPGPPGIAHPVQISFNPTAPSAPIDSSSVALRP
4) IELRKKQDADVPKEHPVSIPINNVMTEKGSAPISLTAPAINTGGREAMAFKPSAVQ
5) KQKSALDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR
6) LAGSSGIQIELPHPGIGNENRASVNEQLDA
7) MASPAWLPQEVKPSVSQSPVSVSPAGGASTQTSASLASSVGLHTSNSSGGSTTDSIQEPLQAKFS
8) SWTGSKPKLEKDPQRRAANPDLEPSDMEKL
519
85
137
459
910
348
1
803
600
123
247
514
947
377
65
832










Molecular Recognition Features






MoRF SequenceStartStop




1) KIVFDPRFKAI
2) LDLIKKKL
3) LFEHYVK
4) MASPAWLPQEV
5) VLWRRF
620
520
639
1
898
630
527
645
11
903