<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14473

Description Uncharacterized protein
SequenceMHPASRFLHLHSLTVCLPMQTSVLEPLSSHHLAIQSNPPASPRVQPPVPGLSSSASPSFSYNIPKSGFSFPNNQQFQSGMNIPPAVAQETGNVSLSSTSSHSGSLPAPTSSSSTMNLSSAPNMGTTTSWVPTGPSFNLTSGMPGTPGTPGPPGIAHPVQISFNPTAPSAPIDSSSVALRPSMQIAPVASSAVQPQVGAPYLSLSSMGAPPQGVWLQSPQIGGFPRPPFLPYPAAFPGPFPLPAHVMPLPSVPLPDSQPPGVIPVGNTAAISSPSAASGHQLAGSSGIQIELPHPGIGNENRASVNEQLDAWTAHKTETGVVYYYNALTGESTYDKPPGFKEEPDKVSMQPTPVSTVNLSGTDWVLVTTSDGKKFYHNGKTKVSSWQIPNEVIELRKKQDADVPKEHPVSIPINNVMTEKGSAPISLTAPAINTGGREAMAFKPSAVQGTSSALDLIKKKLQDSGAPVTSSPVPAPSESNGSRGVESTPKGQQSDNSKDKLKDINGDGNLSDSSSDSEDADSGPTKEECITQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDHKTDYQSFRKKWANDPRFEALDRKDREHLLNERVLPLKRAAEEKAQAVRAAAATSFKSMLQEKGDITVSSRWSRVKDSLRNDPRYKSLRHEDREILFNQYISDLKAVEEEAEREAKAKRDEQEKLRERERELRKRKEREEQETERVRLKVRRKEAVATFQALLVETIKDPQASWTGSKPKLEKDPQRRAANPDLEPSDMEKLFREHIKRLNERCAHEFRALLAEVLTAEAASQETEDGKTVLNSWSTAKRLLKPDPRYNKMARKEREVLWRRFSEEMLRKQKSALDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR
Length928
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-0.744
Instability index57.29
Isoelectric point9.07
Molecular weight102014.35
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14473
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     394.44|      61|      61|     100|     160|       1
---------------------------------------------------------------------------
   11-   84 (29.19/ 8.38)	...................................HS.LTvcLP.MQTSvleplSSH.....HLAI.......QSNPPAsprvqppvpGL.SSSAS.P.SfsynipksG.FSFpnnqQFQ.....S...G..MNIPP
   85-  146 (96.38/45.04)	A..VAQE.TGnV.............SLSSTS...SHS.GS..LP.APTS.....SSS.....TMNL.......SSAPNM.........GT.TTSWV.P.T........G.PSF....NLT.....S...G..MPGTP
  147-  209 (65.78/28.34)	G..TPGP.PG.I.............AHPVQI...SFN.PT..APsAPID.....SSSvalrpSMQI.........AP............V.ASSAVqPqV........GaPYL....SL......S...S..M.GAP
  222-  285 (58.04/24.12)	G..FPRP.PF.L.............PYPAAF......pGP..FP.LP........AH.....VMPL.......PSVPLP.........DSqPPGVI.P.V........G.NTA....AISspsaaS...GhqLAGSS
  286-  352 (56.85/23.47)	GiqIELPhPG.I.............GNENRAsvnEQ......LD.AWTA.....HKT.....ETGV.......VYYYNA.........LT.GESTY.D.K........P.PGF....KEE.....PdkvS..MQPTP
  384-  440 (38.41/13.41)	S..WQIP.NE.VielrkkqdadvpkEHPVSI.....................piNNV.....MTEK.......GSAP.I.........SL.TA.................PAI....N.T.....G...G..REAMA
  441-  488 (49.79/19.62)	F..KP......................................S.AVQG.....TSS.....ALDLikkklqdSGAP............V.TSSPV.P.A........P.SES....NGS.....R...G..VESTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.35|      15|      15|     734|     748|       2
---------------------------------------------------------------------------
  639-  653 (23.34/14.62)	HLLNERVLPLK.RAAE
  734-  748 (25.28/16.48)	EKLRERERELR.KRKE
  751-  765 (19.72/11.16)	EQETERVR.LKvRRKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     328.22|      52|      66|     587|     638|       3
---------------------------------------------------------------------------
  529-  570 (35.65/14.71)	...............................................ITQFKEMLKE.........R...GVAPF.SKWEKelpkivfDPRFKA....IPSHSaRR
  587-  638 (87.41/46.12)	EK.RAAQKA.....................................AIEGFKQLLDEASEDI.DHKT...DYQSFRKKWAN.......DPRFEA....LDRKD.RE
  654-  705 (73.94/37.95)	EKaQAVRAA.....................................AATSFKSMLQE.KGDI.TVSS...RWSRVKDSLRN.......DPRYKS....LRHED.RE
  723-  811 (46.14/21.08)	ER.EA..KAkrdeqeklrererelrkrkereeqetervrlkvrrkeAVATFQALLVETIK...DPQA...SWTGSKPKLEK.......DPQRRAanpdLEPSD.ME
  828-  878 (58.30/28.46)	EF.RALLAE.....................................VLTA.....EAASQETeDGKTvlnSWSTAKRLLKP.......DPRYNK....MARKE.RE
  881-  908 (26.78/ 9.33)	WR.RFSEE......................................MLRKQKSALDH.KE...DRKT...DAKS................................
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14473 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AEREAKAKRDEQEKLRERERELRKRKEREEQETERVR
2) ALDLIKKKLQDSGAPVTSSPVPAPSESNGSRGVESTPKGQQSDNSKDKLKDINGDGNLSDSSSDSEDADSGPTKEECITQFK
3) IELRKKQDADVPKEHPVSIPINNVMTEKGSAPISLTAPAINTGGREAMAFKPSAVQ
4) KQKSALDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR
5) LAGSSGIQIELPHPGIGNENRASVNEQLDA
6) LSSHHLAIQSNPPASPRVQPPVPGLSSSAS
7) NNQQFQSGMNIPPAVAQETGNVSLSSTSSHSGSLPAPTSSSSTMNLSSAPNMGTTTSWVPTGPSFNLTSGMPGTPGTPGPPGIAHPVQISFNPTAPSAPIDSSSVALRP
8) SWTGSKPKLEKDPQRRAANPDLEPSDMEKL
722
452
392
891
281
27
72
784
758
533
447
928
310
56
180
813










Molecular Recognition Features






MoRF SequenceStartStop




1) KIVFDPRFK
2) LFEHYV
3) LIKKKL
4) LWRRF
553
572
455
880
561
577
460
884