<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14472

Description Uncharacterized protein
SequenceMASPAWLPQEVKPSVSQSPVSVSPAGGASTQTSASLASSVGLHTSNSSGGSTTDSIQEPLQAKFSNAPSFAVPASSFSYGVPPNANISFGASQQSSPGSAIQSNPPASPRVQPPVPGLSSSASPSFSYNIPKSGFSFPNNQQFQSGMNIPPAVAQETGNVSLSSTSSHSGSLPAPTSSSSTMNLSSAPNMGTTTSWVPTGPSFNLTSGMPGTPGTPGPPGIAHPVQISFNPTAPSAPIDSSSVALRPSMQIAPVASSAVQPQVGAPYLSLSSMGAPPQGVWLQSPQIGGFPRPPFLPYPAAFPGPFPLPAHVMPLPSVPLPDSQPPGVIPVGNTAAISSPSAASGHQLAGSSGIQIELPHPGIGNENRASVNEQLDAWTAHKTETGVVYYYNALTGESTYDKPPGFKEEPDKVSMQPTPVSTVNLSGTDWVLVTTSDGKKFYHNGKTKVSSWQIPNEVIELRKKQDADVPKEHPVSIPINNVMTEKGSAPISLTAPAINTGGREAMAFKPSAVQGTSSALDLIKKKLQDSGAPVTSSPVPAPSESNGSRGVESTPKGQQSDNSKDKLKDINGDGNLSDSSSDSEDADSGPTKEECITQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSHSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDHKTDYQSFRKKWANDPRFEALDRKDREHLLNERVLPLKRAAEEKAQAVRAAAATSFKSMLQEKGDITVSSRWSRVKDSLRNDPRYKSLRHEDREILFNQYISDLKAVEEEAEREAKAKRDEQEKLRERERELRKRKEREEQETERVRLKVRRKEAVATFQALLVETIKDPQASWTGSKPKLEKDPQRRAANPDLEPSDMEKLFREHIKRLNERCAHEFRALLAEVLTAEAASQETEDGKTVLNSWSTAKRLLKPDPRYNKMARKEREVLWRRFSEEMLRKQKSALDHKEDRKTDAKSRSSVDSGRVPFGSRGTHDRR
Length995
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-0.721
Instability index60.32
Isoelectric point9.02
Molecular weight108121.53
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14472
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     679.11|     101|     101|     144|     244|       1
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    1-   68 (83.53/29.16)	................MASPA....WLP.QE...VKPS.VSQS.....PVSVSPAGGASTQT.SASLASSVGLHT.........S...................NSSGGSTT.DSI.QEPLQAKFSN.AP
   69-  143 (99.49/36.12)	SFAV.PASSFS...yG..VPP....NAN.ISFGASQQS.SPGS.....AIQSNP.PASPR.....VQPPVPGLSS.........SA....SPS.FSYNI....P.......K.SGF.SFPNNQQF.....
  144-  234 (155.29/60.49)	............QS.GMNIPP....AVA.QETGNVSLS.STSS.....HSGSLPAPTSSSSTMNLSSAPNMGTTT.........SW....VPTGPSFNLTSGMPGTPGTPGP.PGI.AHPVQISFNPTAP
  235-  316 (112.28/41.71)	SAPI.DSSSVAlRP.SMQIAPvassAVQ.PQVGAPYLS.LSSM.......GAPP......QGVWLQS.PQIGG.................FPRPPF......LPYPAAFPGPfPLP.AHVM.....PL.P
  317-  418 (99.62/36.18)	SVPLpDSQP.....pGV.IP......VG.NTA...AIS.SPSA.....ASGHQLA.GSSGIQIELPH.PGIGNENrasvneqldAWtahkTETGVVY.YYNALTGESTYDKP.PGFkEEPDKVSMQPT..
  419-  484 (62.67/20.04)	..PV...STVN.................lSGTDWV.LV.TTSDgkkfyHNGK...................TKVS.........SW...qIP.NEVIELRKKQDA..DVPK......EHPVSIPINNVMT
  488-  555 (66.23/21.60)	SAPI.SLTAPA.................iNTGGREAMAfKPSA.....VQGTSSALDLIKKKLQDSGAP...VTS.........SP....VPAPSESNGSRGVESTP.......................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     452.55|      66|      66|     659|     724|       2
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  584-  616 (23.61/11.14)	....................................EDAD.sgptKEECITQF..KEMLKE.........R...GVAPF.SKWEK
  624-  692 (92.94/70.74)	DPRFKA....IPSHSARRS...LFEHY.VK.TRAEEERKE.kraaQKAAIEGF..KQLLDEASEDI.DHKT...DYQSFRKKWAN
  693-  759 (96.17/73.52)	DPRFEA....LDRKDREHL...LNERV.LPLKRAAEEKAQ...avRAAAATSF..KSMLQE.KGDI.TVSS...RWSRVKDSLRN
  760-  805 (66.96/48.41)	DPRYKS....LRHEDREIL...FNQYI.SDLK.AVE.......................EEAEREA.KAKR...DEQ...EKLRE
  806-  861 (69.46/50.56)	RER.EL....RKRKEREEQ...ETERVrLKVRR.............KEAVATF..QALLVETIK...DPQA...SWTGSKPKLEK
  862-  932 (62.74/44.78)	DPQRRAanpdLEPSDMEKL...FREHI....KRLNERCAHefralLAEVLTA.......EAASQETeDGKTvlnSWSTAKRLLKP
  933-  975 (40.67/25.81)	DPRYNK....MARKEREVLwrrFSEEM.LR.......................kqKSALDH.KE...DRKT...DAKS.......
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14472 with Med35 domain of Kingdom Viridiplantae
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