<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14470

Description Uncharacterized protein
SequenceMGLFWELIVVDYLEKIVRCFCGNELSGQKPSTSTVELSLVTFYTHGSYCGCLVQRSGWTRDLDLFLQWLSAIPFSGGGFSDAAIAEGLSEALMMFPTVQNGNQNQQNVDCQKHCILLAASNPHPLPTPVYRPQMQNLEQNEIIDSQTENRLYDAEAVAKSFPQCSVSMSVICPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPQFLVLISENFLEARATLSRPGSTNLPSNQSPVKMDIAPVASVTGPPPTSVPSVNGSVMNRQPVAVGNVPPATVKVEPSTVSSMVAGPAFPHIPSVRPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPVVSGVTHPSRPVGSILNNISQARVMNSAALTGGTSIGLQTMGQNPMAMHVSNMISSGMASSVGAAQNVFSSSGSGTLTQVAQNSGLSSFTSANSNVSGNNNLGISQPMSNLQGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSSGSSSGTGTMIPTPGMPQQVQAGIQSLGANNSSAPNVPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGRADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQVGGQQQQQQQMQQQQPQQHPQLQQQQQQHPQLQQQQHPQLQQQQQQQQLQQQQQHPQMQQQQQQQQHPQMQPQQQQHPQMQPQQQQHPQMQQQPQQHPQLQQQQQQHPQLQQQQQQHPQLQQQQQIPQLQQQQQQQQLPQLQQQQQLPQLQQQQLPQLQQQQLSQLQSQQQLPQLQQLQQQHQQQQLVGTGMGQAYVQGRSQLVSQGQVPSQGSNMPGGGFMG
Length881
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.04
Grand average of hydropathy-0.599
Instability index70.40
Isoelectric point8.74
Molecular weight96033.89
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14470
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     283.73|      34|      37|     663|     697|       1
---------------------------------------------------------------------------
  675-  711 (76.88/15.19)	QQHPQLQQQQQQHPQLQQ..QQH.PQlqqQQQQQ..QLQQQQ
  712-  732 (48.51/ 6.32)	.QHPQMQQQQ......QQ..QQH.PQ...........MQPQQ
  733-  763 (60.53/11.33)	QQHPQMQPQQQQHPQMQQqpQQH.PQ...LQQQQ..Q.....
  764-  796 (49.40/ 7.85)	.QHPQLQQQQQQHPQLQQ..QQQiPQlqqQQQQQ..QL....
  797-  827 (48.41/ 7.54)	...PQL.QQQQQLPQLQQ..QQL.PQ...LQQQQlsQLQSQ.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     229.21|      37|      75|     370|     406|       2
---------------------------------------------------------------------------
  232-  259 (29.53/ 6.12)	........QSP.VKMDI.....APVA.SVTGP....PPtSV.P........S...VNGS
  317-  346 (35.92/ 8.89)	SQ...EMTTNN.ENVPDLKPVVSGVT.HP.......SR.PV................GS
  371-  406 (60.38/19.50)	.Q...TMGQNP.MAMHVSNMISSGMA.SSVGA....AQ.NV.F........S...SSGS
  443-  486 (39.90/10.62)	LQggvSMGQSV.PGMSQGNLSGPQMVqSAIGM....NP.NM.M........SalgSSGS
  490-  527 (30.06/ 6.35)	TG...TMIPTPgMPQQVQAGIQS......LGAnnssAP.NVpL........S...QQTS
  530-  568 (33.41/ 7.80)	LQ...SAQSKY.VKVWEGNL..SGQR.Q........GQ.PV.FitrlegyrS...ASAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.47|      11|     165|     663|     673|       3
---------------------------------------------------------------------------
  663-  673 (23.37/ 6.46)	QQQQQQMQQQQ
  834-  844 (23.09/ 6.28)	QQLQQQHQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      72.13|      15|      60|     583|     597|       4
---------------------------------------------------------------------------
  583-  597 (25.99/16.23)	RLISQDHMNNKQYVG
  601-  614 (21.52/11.93)	FLVFR.AMNQHGFLG
  646-  660 (24.61/14.91)	MLFPGDMVVFKPQVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.40|      23|     116|     156|     198|       8
---------------------------------------------------------------------------
  108-  144 (35.90/24.49)	VDCQKHCILLAA......SNPHPLPTPvyrpqmqnleqneiID
  170-  198 (37.50/19.91)	VICPKQLPKLRAiynagkRNPRAADPP..............ID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      40.73|      14|     116|     298|     314|       9
---------------------------------------------------------------------------
  278-  291 (24.32/ 9.41)	VEPST..VSSM.VAGPA
  298-  314 (16.41/14.41)	VRPPSqgVPSLqTSSPS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14470 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ATLSRPGSTNLPSNQSPVKMDIAPVASVTGPPPTSVPSVNGSVMNRQPVAVGNVPPATVKVEPSTVSSMVAGPAFPHIPSVRPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKPVVSGVTHPSRPVGSILNN
2) QQQQQLQQQQQHPQMQQQQQQQQHPQMQPQQQQHPQMQPQQQQHPQMQQQPQQHPQLQQQQQQHPQLQQQQQQHP
3) QQQQQQMQQQQPQQHPQLQQQQQQHPQLQQQQHPQL
4) QVAQNSGLSSFTSANSNVSGNNNLGISQPMSNLQGGVSMGQSVPGMSQGNLSGPQMVQSAIGMNPNMMSALGSSGSSSGTGTMIPTPGMPQQVQAGIQSLGANNSSAPNVPLSQQTSS
218
702
663
411
350
776
698
528










Molecular Recognition Features






MoRF SequenceStartStop




NANANA